Non-Coding RNA Search

LyN1-MLN01H110026

Sequence:


               
               TATCATTTTAATCCTCATAATAATCCTGTGAATTAAGTACGGTTATTATCTATCCTTATG
TTAATAATCCATCACCTGAGACCTGGAGGAGGTAGGTTAGTCCAAAGTCACCCAGATTGA
AGGAAGTGGCAGAACTGGGATTTGAACCCAGGAAGCCCAGGCATTTTGACCCTGCGTACT
TAGCATATAAGCTGTAGGGCCTCTCCCAGGCTTATATCAGATACCAACTATTTTTACCCC
TCAAAAATGTAGGGCAACATCCCTTAGGAAGAGCACATTATAATTTAACATTTATCCTGC
CATACTCTAAATAATTAACTCCTAGCCATTCCAAGTCGAAACACTAATTTGAATTTCTGT
TGCCCTAATGGAAAAGAAATGGGGTAGTCTCTATTTTTTTCTTAAGGAACGAACTCCCTA
TTTTTTAAAAAATTGCCATTACCGTCCTGAAGTACCTCTTTAAAATCCTGAAATTAATCT
AAAACTTTACTTAAAATTTTTATCTCCCCATGTTTCATTTCCCGTGTGTGATAAAAATTA
GATGTAGCCTTTCAGGCCCAGAGAACCATTGCCAGAAGGGCCTTCCTCCTCCAAAGCTGT
GAGCCCCTAACCCTCAGCCCTGCTGTCTGCTGAAGACCTGGCAGCTTAGAAACTGACCCT
AGAGCAAGGAGACACAGGACTCCTCTCAGGGAACCTGCACTTATGATGTAATTAGGATTG
TACCGCTTATGTGATTCCATCCTCTTGAGAGTGATTTGACACTGAAAATGAAAATGGCTA
AATTGACTGCAATCAGTGCCAAAATAGAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATCATTTTAATCCTCATAATAATCCTGTGAATTAAGTACGGTTATTATCTATCCTTATG
TTAATAATCCATCACCTGAGACCTGGAGGAGGTAGGTTAGTCCAAAGTCACCCAGATTGA
AGGAAGTGGCAGAACTGGGATTTGAACCCAGGAAGCCCAGGCATTTTGACCCTGCGTACT
TAGCATATAAGCTGTAGGGCCTCTCCCAGGCTTATATCAGATACCAACTATTTTTACCCC
TCAAAAATGTAGGGCAACATCCCTTAGGAAGAGCACATTATAATTTAACATTTATCCTGC
CATACTCTAAATAATTAACTCCTAGCCATTCCAAGTCGAAACACTAATTTGAATTTCTGT
TGCCCTAATGGAAAAGAAATGGGGTAGTCTCTATTTTTTTCTTAAGGAACGAACTCCCTA
TTTTTTAAAAAATTGCCATTACCGTCCTGAAGTACCTCTTTAAAATCCTGAAATTAATCT
AAAACTTTACTTAAAATTTTTATCTCCCCATGTTTCATTTCCCGTGTGTGATAAAAATTA
GATGTAGCCTTTCAGGCCCAGAGAACCATTGCCAGAAGGGCCTTCCTCCTCCAAAGCTGT
GAGCCCCTAACCCTCAGCCCTGCTGTCTGCTGAAGACCTGGCAGCTTAGAAACTGACCCT
AGAGCAAGGAGACACAGGACTCCTCTCAGGGAACCTGCACTTATGATGTAATTAGGATTG
TACCGCTTATGTGATTCCATCCTCTTGAGAGTGATTTGACACTGAAAATGAAAATGGCTA
AATTGACTGCAATCAGTGCCAAAATAGAGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               542-697, - strand, RNAz p=0.915416

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               542-697, - strand, RNAz p=0.915416

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-795, gnl|bosTau2|chr17 (4988787-4987984)
               

               
               1-795, gnl|Hg17|chr4 (149530927-149530108)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-795, gnl|bosTau2|chr17 (4988787-4987984)
               

               
               1-795, gnl|Hg17|chr4 (149530927-149530108)

	1-795, gnl\|bosTau2\|chr17 (4988787-4987984)
	1-795, gnl\|Hg17\|chr4 (149530927-149530108)