LyN1-MLN01H110040
               |  | TGTACTGTGTTAGGTGCTAGGAATACACAGTGGATAGGTGGGGTCCATGCCGCACAGAGA
AATGGTCAAGTAAACAATTACCAAGTATGAGAACAGGCACCTGCTGAAGGAGTGGGTGTA
AAACCCCTTCAGCTAGAGGGAACATTCTAGACACTTCAGGAGTCTGGAAGATGTTCCCTT
AGCTGCTTACAGTCTTTTGAGAGCAGGGTGACAAGACGTGACCATGGAGGGTAAATGGCC
AGATTGAAGGGCCCTGTGGGTTTTGTTGAGGGAGTTTGGCCTTTATCTCAGCTTGGGACT
CACTGAGGATATCAAGCAGTGGAATTTATTGAATACTTGGCTTTTTAGAAAGATCATGCT
TATAGTAAACATGCTTATATTTGCTCATATACAGAGAATTAAATGGGAAAGATAAATTCA
GGATGTTAGATATATTCATGAATGAAAATTGAGAACTCAGTgttcctcttgtggctcagt
ggttaatgaatccgactaggaactatgagattgtgggttcgatccctggccccgcttagt
gggttaaggatctggcgttgtcatgagctgtggtgtagttcgcagacaaggctcggatcc
cgagttgctgtggctgtggtgtaggccagtggctccagctctgattagacccctagcctg
gaaacttccatatgtcccgagtgcagccctagaaaagacAAAAAAAGAAAAAAAAAAAAA
AAGAAAATTAAGAACTCATTAGTACACACTTGGTTGCTATTTTTTGTTTTGTTTATCTTT
TTAGGGCCTCACCTGCGGCATGT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | TGTACTGTGTTAGGTGCTAGGAATACACAGTGGATAGGTGGGGTCCATGCCGCACAGAGA
AATGGTCAAGTAAACAATTACCAAGTATGAGAACAGGCACCTGCTGAAGGAGTGGGTGTA
AAACCCCTTCAGCTAGAGGGAACATTCTAGACACTTCAGGAGTCTGGAAGATGTTCCCTT
AGCTGCTTACAGTCTTTTGAGAGCAGGGTGACAAGACGTGACCATGGAGGGTAAATGGCC
AGATTGAAGGGCCCTGTGGGTTTTGTTGAGGGAGTTTGGCCTTTATCTCAGCTTGGGACT
CACTGAGGATATCAAGCAGTGGAATTTATTGAATACTTGGCTTTTTAGAAAGATCATGCT
TATAGTAAACATGCTTATATTTGCTCATATACAGAGAATTAAATGGGAAAGATAAATTCA
GGATGTTAGATATATTCATGAATGAAAATTGAGAACTCAGTgttcctcttgtggctcagt
ggttaatgaatccgactaggaactatgagattgtgggttcgatccctggccccgcttagt
gggttaaggatctggcgttgtcatgagctgtggtgtagttcgcagacaaggctcggatcc
cgagttgctgtggctgtggtgtaggccagtggctccagctctgattagacccctagcctg
gaaacttccatatgtcccgagtgcagccctagaaaagacAAAAAAAGAAAAAAAAAAAAA
AAGAAAATTAAGAACTCATTAGTACACACTTGGTTGCTATTTTTTGTTTTGTTTATCTTT
TTAGGGCCTCACCTGCGGCATGT | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map