Non-Coding RNA Search

LyN2-AR030G03LN05DG03S

Sequence:


               
               CTTTTTGGTAGCTTTTCCTGCTATTCTCATTGCAGTCCTCTTGTTTTTCTCTTATCTTGC
CCAAAGAGCTCCCCCTCAAGGCCCACTCTAGGCCCCTCTTGCCTCTGTACAAGACTAAGA
AAACTGTTTGATTGTCCTTTCCATCCTGGGGTGTAGAATATTCTTGGAAGCTCCATTGAT
TTTTGTCGTCGCACCATCATCTATCTTATAAAACAATTCCAAATTAACTTTTTAAAACCA
TACCGATTTATCACTTTGTGTTTGTGATATAACACGCCTAGAACCTAGAACTGTTGTCAC
TCCTGTAATGAGGCTCCTGTCTGCTTGGGTGACAGCATGTTTGGAGACTCTTTGTCGTCT
CAATATGGTTTTAGGCTTGAAAGTGAGAAAATAGAATAAAAAAGCTAGACCCNNNNNACC
CNNNNNNNNNTNNCNAATGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTTGGTAGCTTTTCCTGCTATTCTCATTGCAGTCCTCTTGTTTTTCTCTTATCTTGC
CCAAAGAGCTCCCCCTCAAGGCCCACTCTAGGCCCCTCTTGCCTCTGTACAAGACTAAGA
AAACTGTTTGATTGTCCTTTCCATCCTGGGGTGTAGAATATTCTTGGAAGCTCCATTGAT
TTTTGTCGTCGCACCATCATCTATCTTATAAAACAATTCCAAATTAACTTTTTAAAACCA
TACCGATTTATCACTTTGTGTTTGTGATATAACACGCCTAGAACCTAGAACTGTTGTCAC
TCCTGTAATGAGGCTCCTGTCTGCTTGGGTGACAGCATGTTTGGAGACTCTTTGTCGTCT
CAATATGGTTTTAGGCTTGAAAGTGAGAAAATAGAATAAAAAAGCTAGACCCNNNNNACC
CNNNNNNNNNTNNCNAATGCTT

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

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               40-151, - strand, RNAz p=0.837142
               

               
               267-384, - strand, RNAz p=0.847554

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-151, - strand, RNAz p=0.837142
               

               
               267-384, - strand, RNAz p=0.847554

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-442, gnl|bosTau2|chr11 (52874390-52873947)
               

               
               1-442, gnl|Hg17|chr2 (27756159-27756604)
               

               
               1-442, gnl|Mm7|chr5 (30512954-30513378)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-442, gnl|bosTau2|chr11 (52874390-52873947)
               

               
               1-442, gnl|Hg17|chr2 (27756159-27756604)
               

               
               1-442, gnl|Mm7|chr5 (30512954-30513378)

	40-151, - strand, RNAz p=0.837142
	267-384, - strand, RNAz p=0.847554

	1-442, gnl\|bosTau2\|chr11 (52874390-52873947)
	1-442, gnl\|Hg17\|chr2 (27756159-27756604)
	1-442, gnl\|Mm7\|chr5 (30512954-30513378)