Non-Coding RNA Search

LyN2-AR058G03LN05ABC08S

Sequence:


               
               GAGAAGTTGAGCTGCAGAGTGGACAATGTCAGTTCTGAGCTCCAGCTGCTTGGTGGTCAT
CTAGAAAACGCCAGCGCTGACATCCAGGTGGTCAAAGGCGTCCTAAAGGATGCCAGCACC
TTGAGTGTTCAGACCCAGGTGTTAAGGAGTTCCTTGGAGGGGACCACTTTTGAGATCCAG
AGGCTAAAGGGAGATCTGGAAGAGGCACAGGCATTAAATTCCCAGGCCCAGAGTTTCTTA
AAAAGCAGCTTNNNAAACACTAGCACTGAGCTCCACGTGGTAAGCGGAGGCTTAGAAAAT
GCCCACATGGAGATCCAGGTGTTGAAGGCTGGGCTGGAAATGGCAAATGCTCATGCCAAG
ATGGCAAACAGTNNNTTAAAAAATGTTGATGCCCAGATNNATGTGTTGAGAGNCNGTCTN
NNNGGGATCAATGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAAGTTGAGCTGCAGAGTGGACAATGTCAGTTCTGAGCTCCAGCTGCTTGGTGGTCAT
CTAGAAAACGCCAGCGCTGACATCCAGGTGGTCAAAGGCGTCCTAAAGGATGCCAGCACC
TTGAGTGTTCAGACCCAGGTGTTAAGGAGTTCCTTGGAGGGGACCACTTTTGAGATCCAG
AGGCTAAAGGGAGATCTGGAAGAGGCACAGGCATTAAATTCCCAGGCCCAGAGTTTCTTA
AAAAGCAGCTTNNNAAACACTAGCACTGAGCTCCACGTGGTAAGCGGAGGCTTAGAAAAT
GCCCACATGGAGATCCAGGTGTTGAAGGCTGGGCTGGAAATGGCAAATGCTCATGCCAAG
ATGGCAAACAGTNNNTTAAAAAATGTTGATGCCCAGATNNATGTGTTGAGAGNCNGTCTN
NNNGGGATCAATGAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               47-166, + strand, RNAz p=0.654187

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               47-166, + strand, RNAz p=0.654187

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               68-173, - strand, RNAmicro p=0.991925

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               68-173, - strand, RNAmicro p=0.991925

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               7-435, gnl|bosTau2|chr11 (9847771-9847343)
               

               
               7-435, gnl|Hg17|chr2 (70955798-70955370)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-435, gnl|bosTau2|chr11 (9847771-9847343)
               

               
               7-435, gnl|Hg17|chr2 (70955798-70955370)

	7-435, gnl\|bosTau2\|chr11 (9847771-9847343)
	7-435, gnl\|Hg17\|chr2 (70955798-70955370)