Lym1-jns01_E04.r
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTGAGTGAGTCATGCGCGCGCGCGGAGGGCAGAGCTGCAAGTCCTGTGACTCCCTGCTG TGAGGAGCCGGGCCCAGGCCTCCTGACTTCTAGGTGGGCTACAGTAGAGCCTTGTTGCCT GGAACACTGCTTGCACGTGAGCACACTGCTGCTATGGAGTGGATTGTCAGGAGCCCAGAT TCTAGCTTCAGCGGTCCTTCACTTGTCCATGAATCCTAGGGCAGCCACCTAATCTCTCTG TGCCTCGCCGTTCTGGTTAGGTTTGGAGGGCGTCCCCGTATATCAGAAGAGAATCCCTCT TGGAGCTAATTTGAAGCCAGTGGGACAGGAGGTGCTGAATCTCCTTGCCTTAGGCTTGGG GGGAAATCAGGAGCTTCTGAGGATCGTGGGAGAAGACAGAGCTGTGAGTCCAGCGTTTTA AGAAGACCCAGACGAAGTAGATCAGTGATTGTCTGATGGTGCCAGGCATGGGGGGAGTTG TGCTGGTACCACCCAAGCGGGCCGGACGCGTGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTGAGTGAGTCATGCGCGCGCGCGGAGGGCAGAGCTGCAAGTCCTGTGACTCCCTGCTG TGAGGAGCCGGGCCCAGGCCTCCTGACTTCTAGGTGGGCTACAGTAGAGCCTTGTTGCCT GGAACACTGCTTGCACGTGAGCACACTGCTGCTATGGAGTGGATTGTCAGGAGCCCAGAT TCTAGCTTCAGCGGTCCTTCACTTGTCCATGAATCCTAGGGCAGCCACCTAATCTCTCTG TGCCTCGCCGTTCTGGTTAGGTTTGGAGGGCGTCCCCGTATATCAGAAGAGAATCCCTCT TGGAGCTAATTTGAAGCCAGTGGGACAGGAGGTGCTGAATCTCCTTGCCTTAGGCTTGGG GGGAAATCAGGAGCTTCTGAGGATCGTGGGAGAAGACAGAGCTGTGAGTCCAGCGTTTTA AGAAGACCCAGACGAAGTAGATCAGTGATTGTCTGATGGTGCCAGGCATGGGGGGAGTTG TGCTGGTACCACCCAAGCGGGCCGGACGCGTGGG |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 259-375, + strand, RNAz p=0.725052 | |
| 304-404, - strand, RNAz p=0.757575 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 259-375, + strand, RNAz p=0.725052 | |
| 304-404, - strand, RNAz p=0.757575 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 31-258, gnl|bosTau2|chr5 (34772524-34772294) | |
| 31-258, gnl|canFam2|chr10 (4595045-4595541) | |
| 31-258, gnl|hg17|chr12 (56201615-56202090) | |
| 31-258, gnl|Hg17|chr12 (56201787-56201990) | |
| 31-258, gnl|loxAfr1|scaffold_6997 (46098-45582) | |
| 31-258, gnl|mm7|chr10 (126791535-126791085) | |
| 31-258, gnl|oryCun1|scaffold_213174 (176290-176701) | |
| 31-258, gnl|panTro1|chr10 (57449416-57449891) | |
| 31-258, gnl|rheMac2|chr11 (54598848-54599325) | |
| 31-258, gnl|rn3|chr7 (67267790-67267369) | |
| 259-502, gnl|bosTau2|chr5 (34770867-34770622) | |
| 259-502, gnl|canFam2|chr10 (4596941-4597547) | |
| 259-502, gnl|dasNov1|scaffold_5444 (52878-52234) | |
| 259-502, gnl|echTel1|scaffold_315420 (57679-57033) | |
| 259-502, gnl|hg17|chr12 (56203396-56204051) | |
| 259-502, gnl|Hg17|chr12 (56203421-56203660) | |
| 259-502, gnl|loxAfr1|scaffold_6997 (43689-43075) | |
| 259-502, gnl|mm7|chr10 (126789754-126789116) | |
| 259-502, gnl|Mm7|chr10 (126789726-126789496) | |
| 259-502, gnl|oryCun1|scaffold_75747 (1090-467) | |
| 259-502, gnl|panTro1|chr10 (57452167-57452822) | |
| 259-502, gnl|rheMac2|chr11 (54600776-54601470) | |
| 259-502, gnl|rn3|chr7 (67266419-67265795) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 31-258, gnl|bosTau2|chr5 (34772524-34772294) | |
| 31-258, gnl|canFam2|chr10 (4595045-4595541) | |
| 31-258, gnl|hg17|chr12 (56201615-56202090) | |
| 31-258, gnl|Hg17|chr12 (56201787-56201990) | |
| 31-258, gnl|loxAfr1|scaffold_6997 (46098-45582) | |
| 31-258, gnl|mm7|chr10 (126791535-126791085) | |
| 31-258, gnl|oryCun1|scaffold_213174 (176290-176701) | |
| 31-258, gnl|panTro1|chr10 (57449416-57449891) | |
| 31-258, gnl|rheMac2|chr11 (54598848-54599325) | |
| 31-258, gnl|rn3|chr7 (67267790-67267369) | |
| 259-502, gnl|bosTau2|chr5 (34770867-34770622) | |
| 259-502, gnl|canFam2|chr10 (4596941-4597547) | |
| 259-502, gnl|dasNov1|scaffold_5444 (52878-52234) | |
| 259-502, gnl|echTel1|scaffold_315420 (57679-57033) | |
| 259-502, gnl|hg17|chr12 (56203396-56204051) | |
| 259-502, gnl|Hg17|chr12 (56203421-56203660) | |
| 259-502, gnl|loxAfr1|scaffold_6997 (43689-43075) | |
| 259-502, gnl|mm7|chr10 (126789754-126789116) | |
| 259-502, gnl|Mm7|chr10 (126789726-126789496) | |
| 259-502, gnl|oryCun1|scaffold_75747 (1090-467) | |
| 259-502, gnl|panTro1|chr10 (57452167-57452822) | |
| 259-502, gnl|rheMac2|chr11 (54600776-54601470) | |
| 259-502, gnl|rn3|chr7 (67266419-67265795) |