Non-Coding RNA Search

Lym1-jns02_C04.f

Sequence:


               
               AAACTCCACACATTTATTTCAGAAGGAAAGGAAAAAGATTAGATAAGGAAATACAGCAAA
ATATTAACACTGTAGTAATAGGGAAGGGAATGCTTATAGCCAACCTACCTTGTGGGGAAG
TTTCTGGCATAAAAATCAAACTTTCCCATCATTCTTTGTGCAAGATTAAAAGCTGCTTTA
CATCAAGAGGGACAGAAAGCCACTTAAATAGTTTTCTTCAAAGGTAGGGAATTTTTTTTT
GAAATGAGCATTAAAGAAAGGAGGAAAAGGAGGGAAAGCTCACTCAAAGAGGTCCTCAAA
CATGCGCTGTCCCATTGCTATGTATGCTTCCTTCTCCTCTGGGGGCGGCTGGGCCACCAG
CTTTGGCTTCTGGCTCACTTCGCTGTAGGAGAACGGACGGCCAGCCACCATGACAATGGG
GTCATCTGCTACTTCCTCAAATTCATAATCCTCCTCATCCTCTTCCCCATGATGTGCAAC
CACAACTGCCGGTCGGGGTGGGGAGTCGTCATCTGACTCACTGGTCTCACTCTCAGAGTC
ACTACCATTGGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACTCCACACATTTATTTCAGAAGGAAAGGAAAAAGATTAGATAAGGAAATACAGCAAA
ATATTAACACTGTAGTAATAGGGAAGGGAATGCTTATAGCCAACCTACCTTGTGGGGAAG
TTTCTGGCATAAAAATCAAACTTTCCCATCATTCTTTGTGCAAGATTAAAAGCTGCTTTA
CATCAAGAGGGACAGAAAGCCACTTAAATAGTTTTCTTCAAAGGTAGGGAATTTTTTTTT
GAAATGAGCATTAAAGAAAGGAGGAAAAGGAGGGAAAGCTCACTCAAAGAGGTCCTCAAA
CATGCGCTGTCCCATTGCTATGTATGCTTCCTTCTCCTCTGGGGGCGGCTGGGCCACCAG
CTTTGGCTTCTGGCTCACTTCGCTGTAGGAGAACGGACGGCCAGCCACCATGACAATGGG
GTCATCTGCTACTTCCTCAAATTCATAATCCTCCTCATCCTCTTCCCCATGATGTGCAAC
CACAACTGCCGGTCGGGGTGGGGAGTCGTCATCTGACTCACTGGTCTCACTCTCAGAGTC
ACTACCATTGGCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               323-553, - strand, RNAz p=0.980239

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               323-553, - strand, RNAz p=0.980239

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_005513, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_005513, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               18-553, gnl|bosTau2|chr1 (31077258-31076717)
               

               
               18-553, gnl|Hg17|chr3 (121983554-121982731)
               

               
               18-553, gnl|Mm7|chr16 (37219513-37220047)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-553, gnl|bosTau2|chr1 (31077258-31076717)
               

               
               18-553, gnl|Hg17|chr3 (121983554-121982731)
               

               
               18-553, gnl|Mm7|chr16 (37219513-37220047)

	18-553, gnl\|bosTau2\|chr1 (31077258-31076717)
	18-553, gnl\|Hg17\|chr3 (121983554-121982731)
	18-553, gnl\|Mm7\|chr16 (37219513-37220047)