Non-Coding RNA Search

Lym1-jns02_G07.r

Sequence:


               
               TGTGGAGCCCACGTGGTACACCTTGTGCGTGTACTGCCCGCTGCCGCCGGGCCCATCTGT
GTAGGGACGGTTGGCCAGGATCTCCACGCCACTGCCCTCGCCACTCGACTCCTCTCGGCT
CTTTTTCTGGATCATGTAGAGCTGGGCCACCTGGTACTCGTCCAAGAATCATGGGCAGCA
GAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGGAGCCCACGTGGTACACCTTGTGCGTGTACTGCCCGCTGCCGCCGGGCCCATCTGT
GTAGGGACGGTTGGCCAGGATCTCCACGCCACTGCCCTCGCCACTCGACTCCTCTCGGCT
CTTTTTCTGGATCATGTAGAGCTGGGCCACCTGGTACTCGTCCAAGAATCATGGGCAGCA
GAAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               4-122, - strand, RNAz p=0.617831

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               4-122, - strand, RNAz p=0.617831

Aligned organism(s): 18 entry(ies)

More info

Aligned organism(s): 18 entry(ies)

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               4-129, gnl|bosTau2|chr29 (39678187-39678062)
               

               
               4-129, gnl|canFam2|chr18 (53001952-53001728)
               

               
               4-129, gnl|danRer3|chrNA (187348406-187348628)
               

               
               4-129, gnl|dasNov1|scaffold_33821 (5889-6113)
               

               
               4-129, gnl|echTel1|scaffold_40102 (712-473)
               

               
               4-129, gnl|fr1|chrUn (35877653-35877428)
               

               
               4-129, gnl|galGal2|chr15 (5112378-5112157)
               

               
               4-129, gnl|hg17|chr11 (67026547-67026772)
               

               
               4-129, gnl|Hg17|chr11 (67026643-67026768)
               

               
               4-129, gnl|mm7|chr19 (3997699-3997474)
               

               
               4-129, gnl|Mm7|chr19 (3997601-3997476)
               

               
               4-129, gnl|monDom2|scaffold_97 (3484835-3485058)
               

               
               4-129, gnl|oryCun1|scaffold_213767 (37197-36974)
               

               
               4-129, gnl|panTro1|chr9 (68287516-68287741)
               

               
               4-129, gnl|rheMac2|chr14 (6954412-6954187)
               

               
               4-129, gnl|rn3|chr1 (206840378-206840153)
               

               
               4-129, gnl|tetNig1|chrUn_random (1286536-1286311)
               

               
               4-129, gnl|xenTro1|scaffold_100 (1917649-1917867)

Aligned organism(s): 18 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-129, gnl|bosTau2|chr29 (39678187-39678062)
               

               
               4-129, gnl|canFam2|chr18 (53001952-53001728)
               

               
               4-129, gnl|danRer3|chrNA (187348406-187348628)
               

               
               4-129, gnl|dasNov1|scaffold_33821 (5889-6113)
               

               
               4-129, gnl|echTel1|scaffold_40102 (712-473)
               

               
               4-129, gnl|fr1|chrUn (35877653-35877428)
               

               
               4-129, gnl|galGal2|chr15 (5112378-5112157)
               

               
               4-129, gnl|hg17|chr11 (67026547-67026772)
               

               
               4-129, gnl|Hg17|chr11 (67026643-67026768)
               

               
               4-129, gnl|mm7|chr19 (3997699-3997474)
               

               
               4-129, gnl|Mm7|chr19 (3997601-3997476)
               

               
               4-129, gnl|monDom2|scaffold_97 (3484835-3485058)
               

               
               4-129, gnl|oryCun1|scaffold_213767 (37197-36974)
               

               
               4-129, gnl|panTro1|chr9 (68287516-68287741)
               

               
               4-129, gnl|rheMac2|chr14 (6954412-6954187)
               

               
               4-129, gnl|rn3|chr1 (206840378-206840153)
               

               
               4-129, gnl|tetNig1|chrUn_random (1286536-1286311)
               

               
               4-129, gnl|xenTro1|scaffold_100 (1917649-1917867)

	4-129, gnl\|bosTau2\|chr29 (39678187-39678062)
	4-129, gnl\|canFam2\|chr18 (53001952-53001728)
	4-129, gnl\|danRer3\|chrNA (187348406-187348628)
	4-129, gnl\|dasNov1\|scaffold_33821 (5889-6113)
	4-129, gnl\|echTel1\|scaffold_40102 (712-473)
	4-129, gnl\|fr1\|chrUn (35877653-35877428)
	4-129, gnl\|galGal2\|chr15 (5112378-5112157)
	4-129, gnl\|hg17\|chr11 (67026547-67026772)
	4-129, gnl\|Hg17\|chr11 (67026643-67026768)
	4-129, gnl\|mm7\|chr19 (3997699-3997474)
	4-129, gnl\|Mm7\|chr19 (3997601-3997476)
	4-129, gnl\|monDom2\|scaffold_97 (3484835-3485058)
	4-129, gnl\|oryCun1\|scaffold_213767 (37197-36974)
	4-129, gnl\|panTro1\|chr9 (68287516-68287741)
	4-129, gnl\|rheMac2\|chr14 (6954412-6954187)
	4-129, gnl\|rn3\|chr1 (206840378-206840153)
	4-129, gnl\|tetNig1\|chrUn_random (1286536-1286311)
	4-129, gnl\|xenTro1\|scaffold_100 (1917649-1917867)