Non-Coding RNA Search

Lym1-jns11bA01.f

Sequence:


               
               GTATTCATTGAGTATCCACTATTTGCCTCACCCTTTCTAGTTATTGTAATACATGTATAC
TTTTAGACATTCAGATATTGAGAATCCAAACATGAATCTGACACGATCCTTATCCTCAGT
TGGCTTTATTTAAATGACCAACAGTGACACCATTGGATGATTATAAGGCATTATAGAAAA
GTAAATAATATGCTTTGGGCACACAAAGAAAGGTGCAAATTTATTCTGACTTGGATAGTT
CAGGAAAGTATTCACAGAGGAGATAGTATTCAGAAAGAAAAATGAAGTGGGCAGGGAGGT
AGCTTTGACATCCATGTTTGCTTTTGTATTTTACACAGTGTGTTGTTAAAAATTAACATG
CTGTGGAGATTCCACTTCTGGGAGATGGAGTAGATGTACTTTTTTTCTGCTTATCCTACT
AAGTACAACTAAAAAACCCCTAAAACTCTATCTATCTACCTAAATGTCTACCTAACTACT
CAAACATAAGAAGGCTCGGAAAGGTGGAAAGAAGGCAAACCAGCAAGGGATATTGGGATC
TGAGTTCCTTGTTTTTTTTGTTTTTGTTTTTTTGTCACATATATCAGACTTGGAGCTGAA
AAACTGGCAACTTGGAAATGCCAATGCATACAGATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTATTCATTGAGTATCCACTATTTGCCTCACCCTTTCTAGTTATTGTAATACATGTATAC
TTTTAGACATTCAGATATTGAGAATCCAAACATGAATCTGACACGATCCTTATCCTCAGT
TGGCTTTATTTAAATGACCAACAGTGACACCATTGGATGATTATAAGGCATTATAGAAAA
GTAAATAATATGCTTTGGGCACACAAAGAAAGGTGCAAATTTATTCTGACTTGGATAGTT
CAGGAAAGTATTCACAGAGGAGATAGTATTCAGAAAGAAAAATGAAGTGGGCAGGGAGGT
AGCTTTGACATCCATGTTTGCTTTTGTATTTTACACAGTGTGTTGTTAAAAATTAACATG
CTGTGGAGATTCCACTTCTGGGAGATGGAGTAGATGTACTTTTTTTCTGCTTATCCTACT
AAGTACAACTAAAAAACCCCTAAAACTCTATCTATCTACCTAAATGTCTACCTAACTACT
CAAACATAAGAAGGCTCGGAAAGGTGGAAAGAAGGCAAACCAGCAAGGGATATTGGGATC
TGAGTTCCTTGTTTTTTTTGTTTTTGTTTTTTTGTCACATATATCAGACTTGGAGCTGAA
AAACTGGCAACTTGGAAATGCCAATGCATACAGATG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               279-427, + strand, RNAz p=0.899402

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               279-427, + strand, RNAz p=0.899402

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-634, gnl|bosTau2|chr14 (41764025-41763395)
               

               
               2-634, gnl|Hg17|chr8 (97749646-97750274)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-634, gnl|bosTau2|chr14 (41764025-41763395)
               

               
               2-634, gnl|Hg17|chr8 (97749646-97750274)

	2-634, gnl\|bosTau2\|chr14 (41764025-41763395)
	2-634, gnl\|Hg17\|chr8 (97749646-97750274)