Non-Coding RNA Search

Lym1-jns22_E06.f

Sequence:


               
               AACTTTTAAGCACAAACATTTGTTTATTCAAATCCAAAAGCCATACAAACTGAAAATGGG
GCTGCACCTAACAGGGGCAGTCTGAAATAAATCAGTGCCAACTGACAATTCCCATTTTCT
TTCAAAAATGGAGGAGAAGAAAGATAACGCCGAGGGGTTCTTAGCTGTACCATTCTCTTA
ATATCATTCATGTTTAAAGCAAGGTCTAGATTTTTCCATTCTGCTACCGAGGTGGGTTCA
AGGTGACGAGCACAAGCTACAGGCAGCCAAGGCCCCAAGCTCTGCCTACCTCTCCTCGGC
CCACTGCCTCAGCCGCTGCTGAGCACTGGGTGAGTGGAAAGAAAATCTGTCCGTGCTCCG
GCAGTTCTGTTTCTCCGGAGACAGCCGTCGCCGGAGCTGTTCTAGTTCGTGTTCATACAT
GAGCCTCTGGCGCTCCAGGGCAGACCGTTTCTCCTCTTCGTGCTGTTGTTCTAGGCTGTT
CAATATGGACTGCATGGGATCATTCCTGCCCAGGGCCTTCATGGTCACCTCCATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACTTTTAAGCACAAACATTTGTTTATTCAAATCCAAAAGCCATACAAACTGAAAATGGG
GCTGCACCTAACAGGGGCAGTCTGAAATAAATCAGTGCCAACTGACAATTCCCATTTTCT
TTCAAAAATGGAGGAGAAGAAAGATAACGCCGAGGGGTTCTTAGCTGTACCATTCTCTTA
ATATCATTCATGTTTAAAGCAAGGTCTAGATTTTTCCATTCTGCTACCGAGGTGGGTTCA
AGGTGACGAGCACAAGCTACAGGCAGCCAAGGCCCCAAGCTCTGCCTACCTCTCCTCGGC
CCACTGCCTCAGCCGCTGCTGAGCACTGGGTGAGTGGAAAGAAAATCTGTCCGTGCTCCG
GCAGTTCTGTTTCTCCGGAGACAGCCGTCGCCGGAGCTGTTCTAGTTCGTGTTCATACAT
GAGCCTCTGGCGCTCCAGGGCAGACCGTTTCTCCTCTTCGTGCTGTTGTTCTAGGCTGTT
CAATATGGACTGCATGGGATCATTCCTGCCCAGGGCCTTCATGGTCACCTCCATCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               228-346, + strand, RNAz p=0.999428

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               228-346, + strand, RNAz p=0.999428

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-501, gnl|bosTau2|chr18 (6236058-6236548)
               

               
               1-501, gnl|Hg17|chr8 (29060568-29061039)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-501, gnl|bosTau2|chr18 (6236058-6236548)
               

               
               1-501, gnl|Hg17|chr8 (29060568-29061039)

	1-501, gnl\|bosTau2\|chr18 (6236058-6236548)
	1-501, gnl\|Hg17\|chr8 (29060568-29061039)