Non-Coding RNA Search

Lym1-jns29_C11.f

Sequence:


               
               CTTAAAGTCTGAAATAACCTTGTTTCTTTCACTCTGATCCATGTCCCCATGGAGTAGGCC
GAGATTATGACCCTCCTGCTTAAGGTTATTGGTTTGCTCTTCAGCATTGGCTTTTTTAGT
AACAAACAGGAAAACACTCCCTGAAGAGGTAAATTCCACTAAACGTCGAGTAAGCCAGTT
CCATTTACTAGGCCCAAAATGGAAAATCTCCACAATCTGAGTTACATTTTCGTTTGCCTT
TCCAATATCTCCCTGCACCACACGAATGGGGTCAATCAGGATGTCTTTGGCCAGTTTTTC
AATTTTTTTCCGAAAAGGGGCACTGAATAAAAAAGTCTGTCTGTCAGGACGGACGTGACT
TGCTATGGATCGCACCTGGTATTCAAATCCCATGTCAAACATCCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTAAAGTCTGAAATAACCTTGTTTCTTTCACTCTGATCCATGTCCCCATGGAGTAGGCC
GAGATTATGACCCTCCTGCTTAAGGTTATTGGTTTGCTCTTCAGCATTGGCTTTTTTAGT
AACAAACAGGAAAACACTCCCTGAAGAGGTAAATTCCACTAAACGTCGAGTAAGCCAGTT
CCATTTACTAGGCCCAAAATGGAAAATCTCCACAATCTGAGTTACATTTTCGTTTGCCTT
TCCAATATCTCCCTGCACCACACGAATGGGGTCAATCAGGATGTCTTTGGCCAGTTTTTC
AATTTTTTTCCGAAAAGGGGCACTGAATAAAAAAGTCTGTCTGTCAGGACGGACGTGACT
TGCTATGGATCGCACCTGGTATTCAAATCCCATGTCAAACATCCGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-120, - strand, RNAz p=0.895259

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-120, - strand, RNAz p=0.895259

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-239, gnl|bosTau2|chr19 (40487583-40487346)
               

               
               1-239, gnl|Hg17|chr17 (59243260-59243022)
               

               
               1-239, gnl|Mm7|chr11 (106350828-106350590)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-239, gnl|bosTau2|chr19 (40487583-40487346)
               

               
               1-239, gnl|Hg17|chr17 (59243260-59243022)
               

               
               1-239, gnl|Mm7|chr11 (106350828-106350590)

	1-239, gnl\|bosTau2\|chr19 (40487583-40487346)
	1-239, gnl\|Hg17\|chr17 (59243260-59243022)
	1-239, gnl\|Mm7\|chr11 (106350828-106350590)