Non-Coding RNA Search

Lym1-jns46_H12.f

Sequence:


               
               GCTAGGGGAAATACAAAGGATATGTTCACTTAGAAAAATGCTTGATCAGATGGGATGCTC
AGAGGAGCTTTATATTTTGTGTGTCTTACTGAATCATTATTGTGACTTTACTTTTAATTA
ATAGATTCCACTGGGAAAAAAAAGGAGAAAACCAAGACAAAGTTTGCTGTCTACTTTCCT
GTCAGCTGAAGCTCAGACTGACAGACACACTGAATTGCCTATGTCATTTATTTATTAAGC
CTGTGTGAGATCTGGTTAAAATAAACAATCAAATGGAAAATTAGCTGGGTAATTTCAAAA
GGAGGGGGAAAAAAAGTCAGTTAGGCAGTGCAATGAAGCTTGAACAGATCAGAAGAAACT
AAAACCCCGGCTTGGTAGATGGCGATACTGGTTTGCATGGAGGAGTTATTTTGCTAAAAG
GAAGTAAAACCGCTTCATGAAATGTGTTGTCCTGTGATATGACGAGCACTGGGCCAGTGT
GCGAAAATGGAAGTGCTGCACGAAGGCTCTATGAAAAAAAATTTTTTTGAACATTTTGTA
CAGTAAACTCTGAGAAATTCCAACAAAGCCTACCCCTTTTTGCTCATGTTTTAAACAATG
ATTTGGGGCAGCAGTAGGGGGAAAAAGAAAGCAATGTATGTTACAGGTTTTCACTCAATA
AA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTAGGGGAAATACAAAGGATATGTTCACTTAGAAAAATGCTTGATCAGATGGGATGCTC
AGAGGAGCTTTATATTTTGTGTGTCTTACTGAATCATTATTGTGACTTTACTTTTAATTA
ATAGATTCCACTGGGAAAAAAAAGGAGAAAACCAAGACAAAGTTTGCTGTCTACTTTCCT
GTCAGCTGAAGCTCAGACTGACAGACACACTGAATTGCCTATGTCATTTATTTATTAAGC
CTGTGTGAGATCTGGTTAAAATAAACAATCAAATGGAAAATTAGCTGGGTAATTTCAAAA
GGAGGGGGAAAAAAAGTCAGTTAGGCAGTGCAATGAAGCTTGAACAGATCAGAAGAAACT
AAAACCCCGGCTTGGTAGATGGCGATACTGGTTTGCATGGAGGAGTTATTTTGCTAAAAG
GAAGTAAAACCGCTTCATGAAATGTGTTGTCCTGTGATATGACGAGCACTGGGCCAGTGT
GCGAAAATGGAAGTGCTGCACGAAGGCTCTATGAAAAAAAATTTTTTTGAACATTTTGTA
CAGTAAACTCTGAGAAATTCCAACAAAGCCTACCCCTTTTTGCTCATGTTTTAAACAATG
ATTTGGGGCAGCAGTAGGGGGAAAAAGAAAGCAATGTATGTTACAGGTTTTCACTCAATA
AA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               395-514, - strand, RNAz p=0.719509

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               395-514, - strand, RNAz p=0.719509

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-621, gnl|bosTau2|chr7 (56578871-56578236)
               

               
               8-621, gnl|Hg17|chr5 (88065599-88066264)
               

               
               8-621, gnl|Mm7|chr13 (80725480-80724794)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-621, gnl|bosTau2|chr7 (56578871-56578236)
               

               
               8-621, gnl|Hg17|chr5 (88065599-88066264)
               

               
               8-621, gnl|Mm7|chr13 (80725480-80724794)

	8-621, gnl\|bosTau2\|chr7 (56578871-56578236)
	8-621, gnl\|Hg17\|chr5 (88065599-88066264)
	8-621, gnl\|Mm7\|chr13 (80725480-80724794)