Non-Coding RNA Search

Lym1-jns51_C06.f

Sequence:


               
               AGGGATACTCCAAGTACATTTATTTATTTTTGGACCCTCCAAGGAAGAAAGAAGTATGAA
AAGTTCAAATGCTTTAACTTTACCAGAGAAAGTGAAGGAAGTAAGAAAGGACATCATTAA
CGCATGCATGAGTCTCTACAGACACCAAAACAAACTTACATAATGTTTATCTGGGTTGTA
TTTCTTATGATAAGTGAAAACAGAGACTTCCTTGATTCGACCATCTTGTCTAAAGGAGTA
TGTTTTGGGTGAAAATGAAAGGATGGGCTCATCATTGGAAGGAAGACCAGAAAAACGCAA
CTGAGCAAGGTTGTGAATGAAGAAGTTAAACTTTGTGGCAATGCTTCCCAAGCTTGATTC
AATTAGCCTTGTAAAGAAAATTGTAGCTTCGGCATCTGTAGTTTGGGGTTGAAGTGCATC
TCTAACGTATTTCAAATCTTGAGTACTTGTAAGTTCAGGTAACCCTGAAGGAATCATCAG
TGAAAGGAGGTTAAGAAAGAGGTTGGTTTGCTTTCTTATCAAGTTGTAGGCTTGACAGCA
GAGGTCCACAAACAACTGGAAACGAATGGTGGGCTTTTCACCCCCATTAATGACATATGC
CATATCAGAGGTCAGTACAAAAGGAGCCCGATCCCTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGGATACTCCAAGTACATTTATTTATTTTTGGACCCTCCAAGGAAGAAAGAAGTATGAA
AAGTTCAAATGCTTTAACTTTACCAGAGAAAGTGAAGGAAGTAAGAAAGGACATCATTAA
CGCATGCATGAGTCTCTACAGACACCAAAACAAACTTACATAATGTTTATCTGGGTTGTA
TTTCTTATGATAAGTGAAAACAGAGACTTCCTTGATTCGACCATCTTGTCTAAAGGAGTA
TGTTTTGGGTGAAAATGAAAGGATGGGCTCATCATTGGAAGGAAGACCAGAAAAACGCAA
CTGAGCAAGGTTGTGAATGAAGAAGTTAAACTTTGTGGCAATGCTTCCCAAGCTTGATTC
AATTAGCCTTGTAAAGAAAATTGTAGCTTCGGCATCTGTAGTTTGGGGTTGAAGTGCATC
TCTAACGTATTTCAAATCTTGAGTACTTGTAAGTTCAGGTAACCCTGAAGGAATCATCAG
TGAAAGGAGGTTAAGAAAGAGGTTGGTTTGCTTTCTTATCAAGTTGTAGGCTTGACAGCA
GAGGTCCACAAACAACTGGAAACGAATGGTGGGCTTTTCACCCCCATTAATGACATATGC
CATATCAGAGGTCAGTACAAAAGGAGCCCGATCCCTTTTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|51476138|emb|CAH18059.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51476138|emb|CAH18059.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-381, gnl|bosTau2|chr15 (23228101-23227725)
               

               
               1-381, gnl|Hg17|chr11 (17075020-17075407)
               

               
               1-381, gnl|Mm7|chr7 (112264209-112264580)
               


               
               471-639, gnl|bosTau2|chr15 (23225406-23225238)
               

               
               471-639, gnl|Hg17|chr11 (17079396-17079562)
               

               
               471-639, gnl|Mm7|chr7 (112267001-112267168)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-381, gnl|bosTau2|chr15 (23228101-23227725)
               

               
               1-381, gnl|Hg17|chr11 (17075020-17075407)
               

               
               1-381, gnl|Mm7|chr7 (112264209-112264580)
               


               
               471-639, gnl|bosTau2|chr15 (23225406-23225238)
               

               
               471-639, gnl|Hg17|chr11 (17079396-17079562)
               

               
               471-639, gnl|Mm7|chr7 (112267001-112267168)

	1-381, gnl\|bosTau2\|chr15 (23228101-23227725)
	1-381, gnl\|Hg17\|chr11 (17075020-17075407)
	1-381, gnl\|Mm7\|chr7 (112264209-112264580)

	471-639, gnl\|bosTau2\|chr15 (23225406-23225238)
	471-639, gnl\|Hg17\|chr11 (17079396-17079562)
	471-639, gnl\|Mm7\|chr7 (112267001-112267168)