Non-Coding RNA Search

Lym1-jns81_G03.f

Sequence:


               
               CAAAAGGGGGAATGGGTCCCTTTTGGGAAAACCGGAAAATTTAAAAAAATTTAAAAAAAC
CCAAGTTTAAAAAAACCCCCCCCCGGAAGTTCCCACCCCCTGCCTTGGGCCCCCCAAGAG
GGGGGGGGCCCCACCCCCAGGGCAAAAAAGGGGGGGGGGCTTTTTGCCCCTTTTCCCCAT
TTTATCCCCATTTAAAACACCAAAGGGGGGCCCCCAGGGGGACCCAAACCAGGGGGGGGG
GGCAGGGCCCCAAGGCCCCGGGGCCTGGGGGGGGAGGCTCGGGGTCCCCCCACCCCCAAA
GCCCCCGGCCTGTATGGGGGGCATGGGCAGGGCCCCTCCTAACCGGGGCCCAAGGGGGGG
GGGGGCTGTTATTCCCAAATCTTGGGGAAGGGGCCCCAGGACCCTGGGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAAGGGGGAATGGGTCCCTTTTGGGAAAACCGGAAAATTTAAAAAAATTTAAAAAAAC
CCAAGTTTAAAAAAACCCCCCCCCGGAAGTTCCCACCCCCTGCCTTGGGCCCCCCAAGAG
GGGGGGGGCCCCACCCCCAGGGCAAAAAAGGGGGGGGGGCTTTTTGCCCCTTTTCCCCAT
TTTATCCCCATTTAAAACACCAAAGGGGGGCCCCCAGGGGGACCCAAACCAGGGGGGGGG
GGCAGGGCCCCAAGGCCCCGGGGCCTGGGGGGGGAGGCTCGGGGTCCCCCCACCCCCAAA
GCCCCCGGCCTGTATGGGGGGCATGGGCAGGGCCCCTCCTAACCGGGGCCCAAGGGGGGG
GGGGGCTGTTATTCCCAAATCTTGGGGAAGGGGCCCCAGGACCCTGGGGCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               9-411, - strand, RNAz p=0.999358

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               9-411, - strand, RNAz p=0.999358

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               124-220, - strand, RNAmicro p=0.973691

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               124-220, - strand, RNAmicro p=0.973691

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of NM_005273, -

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_005273, -

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               9-411, gnl|bosTau2|chr25 (32319029-32319431)
               

               
               9-411, gnl|Hg17|chr7 (99921434-99921033)
               

               
               9-411, gnl|Mm7|chr5 (136446404-136446813)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-411, gnl|bosTau2|chr25 (32319029-32319431)
               

               
               9-411, gnl|Hg17|chr7 (99921434-99921033)
               

               
               9-411, gnl|Mm7|chr5 (136446404-136446813)

	9-411, gnl\|bosTau2\|chr25 (32319029-32319431)
	9-411, gnl\|Hg17\|chr7 (99921434-99921033)
	9-411, gnl\|Mm7\|chr5 (136446404-136446813)