Non-Coding RNA Search

Lym2-sn09_D03.f

Sequence:


               
               GGAATTTCCCTTATTTCTTTATTTTCCAACATAAAGTCTAGTAAAATTGTTTGCCATTAC
CAGCACGTTAAAGCTGCAAGTTTCTTTTCTGGACAATGGCAAATGCTTAAATCCTAAGAG
AGAAAAAAGACGGAGAGCTAGGAGAGAGAGAGTTTACATTTGAAAATACATTCCATGTGA
AAGAACAGTAAGAGAGGATATTGCAGCTTTATACAAAAGGGTCAAGAGACATGAAATTGA
ACTACAGAAAAAAGCGGAACAAGTAAGCCACGTTGCCATATCTTCGGAGCCCTTGCCTTC
CCGGAGGCTGACATCTCACACTAAAATATACTTTCTTCTTAGTCAGTGGGCCACCAGGGT
TGATTAGAGAAGGGGGGCTTTCACCGGCAAGAAAGCGGGGCGGGTTAATGTAACACAATA
AGAACCAGTACAAACAAAAAGGCACTTGAGAGGACGTAGACTAGCCAGTGCCAAGGATTT
TTCGTTGCGGTTGTCGGCTGCACACCCAGTTGCCAGCAGTGTTCGGTGATGGCACAGTTT
TCTGTATGGAGTTCACAGCACGAGGTTTAGTACAACACTGGAAAACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAATTTCCCTTATTTCTTTATTTTCCAACATAAAGTCTAGTAAAATTGTTTGCCATTAC
CAGCACGTTAAAGCTGCAAGTTTCTTTTCTGGACAATGGCAAATGCTTAAATCCTAAGAG
AGAAAAAAGACGGAGAGCTAGGAGAGAGAGAGTTTACATTTGAAAATACATTCCATGTGA
AAGAACAGTAAGAGAGGATATTGCAGCTTTATACAAAAGGGTCAAGAGACATGAAATTGA
ACTACAGAAAAAAGCGGAACAAGTAAGCCACGTTGCCATATCTTCGGAGCCCTTGCCTTC
CCGGAGGCTGACATCTCACACTAAAATATACTTTCTTCTTAGTCAGTGGGCCACCAGGGT
TGATTAGAGAAGGGGGGCTTTCACCGGCAAGAAAGCGGGGCGGGTTAATGTAACACAATA
AGAACCAGTACAAACAAAAAGGCACTTGAGAGGACGTAGACTAGCCAGTGCCAAGGATTT
TTCGTTGCGGTTGTCGGCTGCACACCCAGTTGCCAGCAGTGTTCGGTGATGGCACAGTTT
TCTGTATGGAGTTCACAGCACGAGGTTTAGTACAACACTGGAAAACA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               39-149, - strand, RNAz p=0.731376

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               39-149, - strand, RNAz p=0.731376

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of CR749333, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of CR749333, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-587, gnl|bosTau2|chr13 (10403934-10404518)
               

               
               1-587, gnl|Hg17|chr10 (33507808-33508414)
               

               
               1-587, gnl|Mm7|chr8 (127112725-127112140)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-587, gnl|bosTau2|chr13 (10403934-10404518)
               

               
               1-587, gnl|Hg17|chr10 (33507808-33508414)
               

               
               1-587, gnl|Mm7|chr8 (127112725-127112140)

	1-587, gnl\|bosTau2\|chr13 (10403934-10404518)
	1-587, gnl\|Hg17\|chr10 (33507808-33508414)
	1-587, gnl\|Mm7\|chr8 (127112725-127112140)