Non-Coding RNA Search

Lym2-sn14_C09.f

Sequence:


               
               TCGCGATCTAGAACTAGTGTGAGGAGATGCATGATTATCAGAGGTGAGTTTCACACCCTC
CGCTCATCTCCAACATGAAGGAAAGAACTGGCATAAAACCACAAAACACCCCAAGTAACA
AAAGAAATGGTCATTGTTCTGCTGTATTCACACACATGAACACGAAAGAAAAGTTGTTAG
CTGATGGTTGAGACAGGTTACTCTGGTCCAGCAGATATGCTGAATGAAATAATCAGACAA
GTGCTTGGAGATATTCATCACAACCGTATTTACCAAAAAAAAAAAATGAAAACAAACCTA
AGTTTTCAGTTACAGTGAATTGGTTAAACAAGTAATAGGACATCCATATGATGAAATATT
AAATAGATCTTAAAAATAACAGCATGTGACttcccttcatggcttagtggttaaagaacc
tgactaggaaccatgatgatatgggtttgatccctggccttgctcagtgggttaaggatc
tggcgctgctggctgccgtgagcagatgtggcttggatcccacgtagctgtggctgttgc
tggcagctgtagctccaatttgacccctagcctaggaatttccatatgccatgggtgcag
ccctaAAAAGCAAACAAACAAATAAATAAATAAATAAATAACAGCACTAATGGATATTTA
TTTATTTATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGCGATCTAGAACTAGTGTGAGGAGATGCATGATTATCAGAGGTGAGTTTCACACCCTC
CGCTCATCTCCAACATGAAGGAAAGAACTGGCATAAAACCACAAAACACCCCAAGTAACA
AAAGAAATGGTCATTGTTCTGCTGTATTCACACACATGAACACGAAAGAAAAGTTGTTAG
CTGATGGTTGAGACAGGTTACTCTGGTCCAGCAGATATGCTGAATGAAATAATCAGACAA
GTGCTTGGAGATATTCATCACAACCGTATTTACCAAAAAAAAAAAATGAAAACAAACCTA
AGTTTTCAGTTACAGTGAATTGGTTAAACAAGTAATAGGACATCCATATGATGAAATATT
AAATAGATCTTAAAAATAACAGCATGTGACttcccttcatggcttagtggttaaagaacc
tgactaggaaccatgatgatatgggtttgatccctggccttgctcagtgggttaaggatc
tggcgctgctggctgccgtgagcagatgtggcttggatcccacgtagctgtggctgttgc
tggcagctgtagctccaatttgacccctagcctaggaatttccatatgccatgggtgcag
ccctaAAAAGCAAACAAACAAATAAATAAATAAATAAATAACAGCACTAATGGATATTTA
TTTATTTATTTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               170-261, + strand, RNAz p=0.955011

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               170-261, + strand, RNAz p=0.955011

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               170-386, gnl|bosTau2|chr7 (26755731-26755518)
               

               
               170-386, gnl|Hg17|chr1 (245318866-245319270)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               170-386, gnl|bosTau2|chr7 (26755731-26755518)
               

               
               170-386, gnl|Hg17|chr1 (245318866-245319270)

	170-386, gnl\|bosTau2\|chr7 (26755731-26755518)
	170-386, gnl\|Hg17\|chr1 (245318866-245319270)