Non-Coding RNA Search

Lym2-sn23_E12.f

Sequence:


               
               CATTTTCCACCATTTACTCTTGTTATCAAAAATAGTTCAACTCTTCTTGCAAAACAAAAA
CAAAATAGTACATACTGGACACATACATCACATTTTTCTTCCTATGGCTTTAGCCCATCT
TTCACCCCACCAAAAGAGACATTTGGAAAAAAAAAAAAAAAAAAAAAAAAAGCCCAACAA
CAACAACAAAAAACAACTTTACCTGACCACATTCACAGAAAATGACACCAGGATACACTA
CAAAACAGAAGGAGGTGTCATCTGCTCTGTGTCCAAAGATTTCTTCTCCATATCTTGTAC
TAGGTGAGTAACCATCATTGAACATGCTGTGTGCCAAATCAAAACATAACTTCAACATAT
GTCCTATCTCAGGAGAGATGGTGAACGTAGTAAAAACTGAAAATTTTCCAGCAGTATTTT
TCTTAAAATAAGCACTGTCAAAGCAGCAATTCTTCTTTTAAATCATAAGGTCATTTCTTT
ACAAACTAGTCAGTCCTTGTTTTATTTGGGCTGTGCTCTTGCAAACAACTGACTAGATTT
CCCTTCAACAGAATGTTTGTGACTCACTTGTCTTCCCCATAAAAATTACAGAGAAGTGCA
TTTAAACTGAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTTTCCACCATTTACTCTTGTTATCAAAAATAGTTCAACTCTTCTTGCAAAACAAAAA
CAAAATAGTACATACTGGACACATACATCACATTTTTCTTCCTATGGCTTTAGCCCATCT
TTCACCCCACCAAAAGAGACATTTGGAAAAAAAAAAAAAAAAAAAAAAAAAGCCCAACAA
CAACAACAAAAAACAACTTTACCTGACCACATTCACAGAAAATGACACCAGGATACACTA
CAAAACAGAAGGAGGTGTCATCTGCTCTGTGTCCAAAGATTTCTTCTCCATATCTTGTAC
TAGGTGAGTAACCATCATTGAACATGCTGTGTGCCAAATCAAAACATAACTTCAACATAT
GTCCTATCTCAGGAGAGATGGTGAACGTAGTAAAAACTGAAAATTTTCCAGCAGTATTTT
TCTTAAAATAAGCACTGTCAAAGCAGCAATTCTTCTTTTAAATCATAAGGTCATTTCTTT
ACAAACTAGTCAGTCCTTGTTTTATTTGGGCTGTGCTCTTGCAAACAACTGACTAGATTT
CCCTTCAACAGAATGTTTGTGACTCACTTGTCTTCCCCATAAAAATTACAGAGAAGTGCA
TTTAAACTGAAAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               480-596, - strand, RNAz p=0.643237

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               480-596, - strand, RNAz p=0.643237

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               5' of AK001408, -

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               5' of AK001408, -

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-613, gnl|bosTau2|chr1 (85985755-85985153)
               

               
               1-613, gnl|Hg17|chr3 (137350988-137351591)
               

               
               1-613, gnl|Mm7|chr9 (100793792-100793206)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-613, gnl|bosTau2|chr1 (85985755-85985153)
               

               
               1-613, gnl|Hg17|chr3 (137350988-137351591)
               

               
               1-613, gnl|Mm7|chr9 (100793792-100793206)

	1-613, gnl\|bosTau2\|chr1 (85985755-85985153)
	1-613, gnl\|Hg17\|chr3 (137350988-137351591)
	1-613, gnl\|Mm7\|chr9 (100793792-100793206)