Non-Coding RNA Search

Lym2-sn30_A02.f

Sequence:


               
               ACCAATCTTACGAAAATAATTGGCAATTAACGATCTCGTCCCTGCATAGCATTTTTTTAA
ATGGAATCAATTAAAGAGGAAAAGATTTGACTCCGCGCTCGCCCCAAGCATCGTACCTTG
CGTTTTCTAGAGACGTTGGAAAGGTCAACGCCGCTTCAAAGTCAGCCTTCAGTCTGGATG
GACGGCCACCAGGAGGCAACATGCTTTTAGATTGTTCCACTGGCTTTGAAATGAGCTAAA
CTTCTGACTTCCTAAAATGTCAGCCTCATAAATTCACCCCTCAAACACAAGCAGGTGTGG
TCAGCTTTCAGCAGATGTCCTCTTAGCCGTGACATCTGGGCCGTGAGCTACAGCCCCACG
AAGAACCACGTCCAGTGCTTGTCCCAAAAAGCCTGAAAGAGACCCGGTGATGAGAGTTCA
AGTGCTTTGTGCTTCCCCTCTTCGAATTTTCCATTCACCCACCTTTTCCCCAATTCCAGG
AATTTGGGATTAAAAGAAACGCACTTACGATTTTGGCACACGTGACCTTGAGAAGCACAG
ATGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAATCTTACGAAAATAATTGGCAATTAACGATCTCGTCCCTGCATAGCATTTTTTTAA
ATGGAATCAATTAAAGAGGAAAAGATTTGACTCCGCGCTCGCCCCAAGCATCGTACCTTG
CGTTTTCTAGAGACGTTGGAAAGGTCAACGCCGCTTCAAAGTCAGCCTTCAGTCTGGATG
GACGGCCACCAGGAGGCAACATGCTTTTAGATTGTTCCACTGGCTTTGAAATGAGCTAAA
CTTCTGACTTCCTAAAATGTCAGCCTCATAAATTCACCCCTCAAACACAAGCAGGTGTGG
TCAGCTTTCAGCAGATGTCCTCTTAGCCGTGACATCTGGGCCGTGAGCTACAGCCCCACG
AAGAACCACGTCCAGTGCTTGTCCCAAAAAGCCTGAAAGAGACCCGGTGATGAGAGTTCA
AGTGCTTTGTGCTTCCCCTCTTCGAATTTTCCATTCACCCACCTTTTCCCCAATTCCAGG
AATTTGGGATTAAAAGAAACGCACTTACGATTTTGGCACACGTGACCTTGAGAAGCACAG
ATGCC

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               333-273, , RaveNnA Score=14.96

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               333-273, , RaveNnA Score=14.96