Non-Coding RNA Search

Lym2-sn35_A03.f1

Sequence:


               
               CAGGGCTGAACCTCCATATACTGGGGGTGCAGCCCTGAAAAAGAAAGAAGTAAAAATAAA
AATACAGAATTTGCAGTTAAATGTGAATTTCAAATAGACAAAGAATATCTTCTTAGGATA
TCTCAAATGTTCCAATATATGTCCCAGATATCTGCCCCTAAGCCTCTCTCCCCCAGACAC
ATTCAGTAGAACACAAAGTACTCTCAATGCCTCAAGTATTTATATCAATAGGTCCCTAAT
AGTGAATTCTAGAGTAAAACAAAGATATGGAAATTTTGGCATCTAGTTCATGTGATACAT
TTATAGAACAGTGAGCTCTGATTACATTTCTTTCTAATCAAATGCTATTCCTCCGGTCTC
CAGGCCTGAGATTTCCCCTCCTTCAGCTGGATTCTCTATAGGCAGAGTGATTGGGGAAGA
TGATGCAGGCTAACATAAATTATCCTAGCGGGAAAAGTTAGAGCCTCAGAGAATGGCTCT
AACCCAGATAATTCATTCTGTAGACAAAAGAGAAGGTTAATCTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGGCTGAACCTCCATATACTGGGGGTGCAGCCCTGAAAAAGAAAGAAGTAAAAATAAA
AATACAGAATTTGCAGTTAAATGTGAATTTCAAATAGACAAAGAATATCTTCTTAGGATA
TCTCAAATGTTCCAATATATGTCCCAGATATCTGCCCCTAAGCCTCTCTCCCCCAGACAC
ATTCAGTAGAACACAAAGTACTCTCAATGCCTCAAGTATTTATATCAATAGGTCCCTAAT
AGTGAATTCTAGAGTAAAACAAAGATATGGAAATTTTGGCATCTAGTTCATGTGATACAT
TTATAGAACAGTGAGCTCTGATTACATTTCTTTCTAATCAAATGCTATTCCTCCGGTCTC
CAGGCCTGAGATTTCCCCTCCTTCAGCTGGATTCTCTATAGGCAGAGTGATTGGGGAAGA
TGATGCAGGCTAACATAAATTATCCTAGCGGGAAAAGTTAGAGCCTCAGAGAATGGCTCT
AACCCAGATAATTCATTCTGTAGACAAAAGAGAAGGTTAATCTGGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               411-527, - strand, RNAz p=0.942942

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               411-527, - strand, RNAz p=0.942942

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               54-527, gnl|bosTau2|chr11 (37567685-37567211)
               

               
               54-527, gnl|Hg17|chr6 (139875588-139876064)
               

               
               54-527, gnl|Mm7|chr10 (17320656-17320214)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-527, gnl|bosTau2|chr11 (37567685-37567211)
               

               
               54-527, gnl|Hg17|chr6 (139875588-139876064)
               

               
               54-527, gnl|Mm7|chr10 (17320656-17320214)

	54-527, gnl\|bosTau2\|chr11 (37567685-37567211)
	54-527, gnl\|Hg17\|chr6 (139875588-139876064)
	54-527, gnl\|Mm7\|chr10 (17320656-17320214)