Non-Coding RNA Search

Lym2-sn53_H10.f

Sequence:


               
               GAATTTGAAATTGTTGGAATACTTGCACTCCTTTTGAAAATCTTTGCTGGGTATAAACAT
ATAAAGATTAATGATCTATATGGCTAAGCCGCCTCCCAAGCAATACACAGAGTTCTGGCT
AAGCATGTCATTCTACTGGACCTTAAGGCTTAACAAGCAAAAGCAAAAATGTTTTTAAGC
TGGAAATTAAGAGACAGATAGTAATAAAATATGCCTGCAGCAGCTTTTTTTAATGGATTT
ATACACAATTTACCTATTCATGTGCTAAATGATAATTTAATAATACCAGCCATCATCTTA
CCCTAAGATCCATTTTTCTCCATGGCTCCTTATTAGGGTTCAGTTCATAAATGTTATTTC
TTCTGACAGCCTCAATATAAGCTTCATGACCCTGTCGAAAATATATCACCTCATCACCCA
TTTGAGGAACAAAAGGAGACTTTCGAAGTGTGGCGTCTGTTATCCAAACTGGAAGATGAT
ACTCATACAAATGTTCCACGTCTGCACGCTCTGCCGGAGTCGCCCGCCGCAAGTTCTCTT
TTTTAGACTTATTTTCTTTCTTTCTCTTTCGCCTCCTTTTTGGAGGAGACAAATTCTCGG
TAGAGACTTCATCCTCTGAACTACTGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATTTGAAATTGTTGGAATACTTGCACTCCTTTTGAAAATCTTTGCTGGGTATAAACAT
ATAAAGATTAATGATCTATATGGCTAAGCCGCCTCCCAAGCAATACACAGAGTTCTGGCT
AAGCATGTCATTCTACTGGACCTTAAGGCTTAACAAGCAAAAGCAAAAATGTTTTTAAGC
TGGAAATTAAGAGACAGATAGTAATAAAATATGCCTGCAGCAGCTTTTTTTAATGGATTT
ATACACAATTTACCTATTCATGTGCTAAATGATAATTTAATAATACCAGCCATCATCTTA
CCCTAAGATCCATTTTTCTCCATGGCTCCTTATTAGGGTTCAGTTCATAAATGTTATTTC
TTCTGACAGCCTCAATATAAGCTTCATGACCCTGTCGAAAATATATCACCTCATCACCCA
TTTGAGGAACAAAAGGAGACTTTCGAAGTGTGGCGTCTGTTATCCAAACTGGAAGATGAT
ACTCATACAAATGTTCCACGTCTGCACGCTCTGCCGGAGTCGCCCGCCGCAAGTTCTCTT
TTTTAGACTTATTTTCTTTCTTTCTCTTTCGCCTCCTTTTTGGAGGAGACAAATTCTCGG
TAGAGACTTCATCCTCTGAACTACTGCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               250-411, - strand, RNAz p=0.833771

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               250-411, - strand, RNAz p=0.833771

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               11-411, gnl|bosTau2|chr1 (89231374-89230973)
               

               
               11-411, gnl|Hg17|chr21 (39525642-39526082)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-411, gnl|bosTau2|chr1 (89231374-89230973)
               

               
               11-411, gnl|Hg17|chr21 (39525642-39526082)

	11-411, gnl\|bosTau2\|chr1 (89231374-89230973)
	11-411, gnl\|Hg17\|chr21 (39525642-39526082)