Non-Coding RNA Search

Lym2-sn55_B05.f

Sequence:


               
               GGTCTTTCGAAGGTGGTACACTTggcatatagaaattcccaggctaggggtcaaattgga
gctgtagctgccagcctacaccacagccacaccagatccaaacgccatctttgacctaca
ccacagctcactgcaatgccggatccccactgaatgaggccagggaccaaggccacatcc
tcatggatactagtcggattcttaacccactaagccaccacaggaactccTGTGAAACGC
ACTTAACACTTGTCAATTGAAAATCAAAAAATTAAATGCTGTCCAGGTCTTAGCAACTGC
TATGGAACCACTAGTAGAAAGGTTTAAAGCATGACTGCAATTAGCCTTTTCCCTCTCACA
TAGTTTTACAGACTCCTATTGCAGAAGCTAAATATAACTTCTGCACTTGAGCAAGTTTAC
CATAGAGCAACAGAGCTATTTTCATCCATCACCATCCCCAAGACTAAAGGGAAAAGAGTC
AACCTTCTACACTGTAGAAGAAATTGCTTCAGCAATGAAAACCCTCTTATCATGACAAAA
TTCAGAAACTAACACACAAACAAAAAATAAGTCCTAATTTGGTCATTAAGTCACTGACAA
GTCTGCACTTGAAATCCACAGAGATTTGTCTCTTGGAAGACATTCTTTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTCTTTCGAAGGTGGTACACTTggcatatagaaattcccaggctaggggtcaaattgga
gctgtagctgccagcctacaccacagccacaccagatccaaacgccatctttgacctaca
ccacagctcactgcaatgccggatccccactgaatgaggccagggaccaaggccacatcc
tcatggatactagtcggattcttaacccactaagccaccacaggaactccTGTGAAACGC
ACTTAACACTTGTCAATTGAAAATCAAAAAATTAAATGCTGTCCAGGTCTTAGCAACTGC
TATGGAACCACTAGTAGAAAGGTTTAAAGCATGACTGCAATTAGCCTTTTCCCTCTCACA
TAGTTTTACAGACTCCTATTGCAGAAGCTAAATATAACTTCTGCACTTGAGCAAGTTTAC
CATAGAGCAACAGAGCTATTTTCATCCATCACCATCCCCAAGACTAAAGGGAAAAGAGTC
AACCTTCTACACTGTAGAAGAAATTGCTTCAGCAATGAAAACCCTCTTATCATGACAAAA
TTCAGAAACTAACACACAAACAAAAAATAAGTCCTAATTTGGTCATTAAGTCACTGACAA
GTCTGCACTTGAAATCCACAGAGATTTGTCTCTTGGAAGACATTCTTTCTA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               320-553, - strand, RNAz p=0.869047

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               320-553, - strand, RNAz p=0.869047

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               242-618, gnl|bosTau2|chr11 (27871087-27871464)
               

               
               242-618, gnl|Hg17|chr2 (55114676-55115050)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               242-618, gnl|bosTau2|chr11 (27871087-27871464)
               

               
               242-618, gnl|Hg17|chr2 (55114676-55115050)

	242-618, gnl\|bosTau2\|chr11 (27871087-27871464)
	242-618, gnl\|Hg17\|chr2 (55114676-55115050)