Non-Coding RNA Search

Lym2-sn57_F01.f

Sequence:


               
               GTAAATAAAAACCATGTTATAAACATGTGACAAAGCCCAGTCTGGTTCTCTGATAAGATT
AATTATTTATACATCCTTGATACATATAAATAAGTAAAAAAAGAGGGAAAGTTGAAATAA
CCAAAGTTAAGAATGAAAAAAGGGGCCATCACTACAGATCTAGGAGATATTCAGTGATAA
ATTATGGCAAGTCCCTGTCCCTGGCTCACTCGGTCACAGTGTTTGCGGGCATTTGGGCAT
CCCCTTTTCTCTGTCCCTGATCCTACAGTGTTGTTTCTCCTCAGCTATGGCAATGACCAG
ACGTATTTTGAAGAAATCAAACAGTTTTACTACCGAGATGAGTTCAGCCATCAGGTGCAG
GAGTGGAACCGGCAGCGCACCATGGCCATTGAGCGAGCTTTGCAGCAGTTCCTCTATGTG
CAGATGGCCAAAGAGCTCAAGAACAAGCTGCTGGCCGAAGCCAAAGAATATGTCATAAAG
GTGAGGACAGGAACTCATGATCTTAGTCATGTGATTTCCCTAAACTAGAGCTGAGAGTAA
GGAACTCTTAATGCTGTAGTTAATGGGGAAACCCCAGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAAATAAAAACCATGTTATAAACATGTGACAAAGCCCAGTCTGGTTCTCTGATAAGATT
AATTATTTATACATCCTTGATACATATAAATAAGTAAAAAAAGAGGGAAAGTTGAAATAA
CCAAAGTTAAGAATGAAAAAAGGGGCCATCACTACAGATCTAGGAGATATTCAGTGATAA
ATTATGGCAAGTCCCTGTCCCTGGCTCACTCGGTCACAGTGTTTGCGGGCATTTGGGCAT
CCCCTTTTCTCTGTCCCTGATCCTACAGTGTTGTTTCTCCTCAGCTATGGCAATGACCAG
ACGTATTTTGAAGAAATCAAACAGTTTTACTACCGAGATGAGTTCAGCCATCAGGTGCAG
GAGTGGAACCGGCAGCGCACCATGGCCATTGAGCGAGCTTTGCAGCAGTTCCTCTATGTG
CAGATGGCCAAAGAGCTCAAGAACAAGCTGCTGGCCGAAGCCAAAGAATATGTCATAAAG
GTGAGGACAGGAACTCATGATCTTAGTCATGTGATTTCCCTAAACTAGAGCTGAGAGTAA
GGAACTCTTAATGCTGTAGTTAATGGGGAAACCCCAGGGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|4096738|gb|AAC99996.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|4096738|gb|AAC99996.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               371-490, - strand, RNAz p=0.741936

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               371-490, - strand, RNAz p=0.741936

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               217-496, gnl|bosTau2|chr19 (13655404-13655680)
               

               
               217-496, gnl|Hg17|chr17 (24034695-24034977)
               

               
               217-496, gnl|Mm7|chr11 (78307148-78306876)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               217-496, gnl|bosTau2|chr19 (13655404-13655680)
               

               
               217-496, gnl|Hg17|chr17 (24034695-24034977)
               

               
               217-496, gnl|Mm7|chr11 (78307148-78306876)

	217-496, gnl\|bosTau2\|chr19 (13655404-13655680)
	217-496, gnl\|Hg17\|chr17 (24034695-24034977)
	217-496, gnl\|Mm7\|chr11 (78307148-78306876)