Lym2-sn58_A04.f
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGCGATCTAGAACTAGTTCCTAGTCGGATTCGTTTCCACTGCACCACAACGGGAACTCC TCCCCCACCTCTTCTTTACCTCTCTTAAAAGAGATTCATCCCAATGTTCCCTCCCACTGA GTCCCAGGCTCACCTGTGCCCTTCACCTGGAAGTCAGTACGGCGCTGCAGCGTGGATGGC AGCTCATTCAGCCGGAGGCTCAGCTGTCGTTTGAAAGGCGAGTTCTTCTGGCTGAGTGCC GGGAACCCACGGAAGGAGCCCTGGCGAACCAGCTGCTCCAGGGGAGCGTGGCGCCGGGGG ATGGCGGCTGCAGTGGTACCTGCGGCCACTGGGGTGCCTGCCTCACCCTTCTCGCCAGGG GATGTGGTGGCCGGTGTTGGGGACACGTGCCCAGGCTGGGCAGGGCCAGGAGCCACAGTT GGGGCAGCTGCTGCCTCTGCTGGAAACAAGGCGGGGACAGCTGGTTAGGTACCTCACTTT GGCATTGGAGGCCCCAGACCTCTTAACTCTTTTCCTTACCCATTGTGCCCTGCCCTCAAG GCAAGCTGGCCAGAGCCCTGAAGTGTCCCTCATCCCCACCCAAGCCAGGACCGCCTTCCC ACAAGGCCTTTGGGGAGTCGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGCGATCTAGAACTAGTTCCTAGTCGGATTCGTTTCCACTGCACCACAACGGGAACTCC TCCCCCACCTCTTCTTTACCTCTCTTAAAAGAGATTCATCCCAATGTTCCCTCCCACTGA GTCCCAGGCTCACCTGTGCCCTTCACCTGGAAGTCAGTACGGCGCTGCAGCGTGGATGGC AGCTCATTCAGCCGGAGGCTCAGCTGTCGTTTGAAAGGCGAGTTCTTCTGGCTGAGTGCC GGGAACCCACGGAAGGAGCCCTGGCGAACCAGCTGCTCCAGGGGAGCGTGGCGCCGGGGG ATGGCGGCTGCAGTGGTACCTGCGGCCACTGGGGTGCCTGCCTCACCCTTCTCGCCAGGG GATGTGGTGGCCGGTGTTGGGGACACGTGCCCAGGCTGGGCAGGGCCAGGAGCCACAGTT GGGGCAGCTGCTGCCTCTGCTGGAAACAAGGCGGGGACAGCTGGTTAGGTACCTCACTTT GGCATTGGAGGCCCCAGACCTCTTAACTCTTTTCCTTACCCATTGTGCCCTGCCCTCAAG GCAAGCTGGCCAGAGCCCTGAAGTGTCCCTCATCCCCACCCAAGCCAGGACCGCCTTCCC ACAAGGCCTTTGGGGAGTCGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 172-371, - strand, RNAz p=0.939533 | |
| 412-511, + strand, RNAz p=0.650772 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 172-371, - strand, RNAz p=0.939533 | |
| 412-511, + strand, RNAz p=0.650772 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 94-619, gnl|bosTau2|chr18 (45392459-45393004) | |
| 94-619, gnl|Hg17|chr19 (45871048-45871596) | |
| 94-619, gnl|Mm7|chr7 (24195831-24194821) | |
| 132-306, gnl|bosTau2|chr10 (59804193-59804367) | |
| 132-306, gnl|canFam2|chr8 (49665473-49665663) | |
| 132-306, gnl|danRer3|chrUn (181876741-181876926) | |
| 132-306, gnl|dasNov1|scaffold_3567 (19987-20163) | |
| 132-306, gnl|echTel1|scaffold_166865 (3177-2988) | |
| 132-306, gnl|galGal2|chr5 (23545965-23545789) | |
| 132-306, gnl|hg17|chr14 (72820525-72820715) | |
| 132-306, gnl|Hg17|chr14 (72820540-72820714) | |
| 132-306, gnl|loxAfr1|scaffold_12485 (18419-18609) | |
| 132-306, gnl|mm7|chr12 (81797047-81797223) | |
| 132-306, gnl|Mm7|chr12 (81797048-81797222) | |
| 132-306, gnl|monDom2|scaffold_8 (61899022-61898832) | |
| 132-306, gnl|oryCun1|scaffold_61362 (1740-1565) | |
| 132-306, gnl|panTro1|chr15 (72608585-72608775) | |
| 132-306, gnl|rheMac2|chr7 (136400766-136400956) | |
| 132-306, gnl|rn3|chr6 (107847589-107847765) | |
| 132-306, gnl|tetNig1|chr10 (11714007-11714183) | |
| 132-306, gnl|xenTro1|scaffold_799 (453421-453233) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 94-619, gnl|bosTau2|chr18 (45392459-45393004) | |
| 94-619, gnl|Hg17|chr19 (45871048-45871596) | |
| 94-619, gnl|Mm7|chr7 (24195831-24194821) | |
| 132-306, gnl|bosTau2|chr10 (59804193-59804367) | |
| 132-306, gnl|canFam2|chr8 (49665473-49665663) | |
| 132-306, gnl|danRer3|chrUn (181876741-181876926) | |
| 132-306, gnl|dasNov1|scaffold_3567 (19987-20163) | |
| 132-306, gnl|echTel1|scaffold_166865 (3177-2988) | |
| 132-306, gnl|galGal2|chr5 (23545965-23545789) | |
| 132-306, gnl|hg17|chr14 (72820525-72820715) | |
| 132-306, gnl|Hg17|chr14 (72820540-72820714) | |
| 132-306, gnl|loxAfr1|scaffold_12485 (18419-18609) | |
| 132-306, gnl|mm7|chr12 (81797047-81797223) | |
| 132-306, gnl|Mm7|chr12 (81797048-81797222) | |
| 132-306, gnl|monDom2|scaffold_8 (61899022-61898832) | |
| 132-306, gnl|oryCun1|scaffold_61362 (1740-1565) | |
| 132-306, gnl|panTro1|chr15 (72608585-72608775) | |
| 132-306, gnl|rheMac2|chr7 (136400766-136400956) | |
| 132-306, gnl|rn3|chr6 (107847589-107847765) | |
| 132-306, gnl|tetNig1|chr10 (11714007-11714183) | |
| 132-306, gnl|xenTro1|scaffold_799 (453421-453233) |