Lym2-sn58_C03.f
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTAAACCTTTTGTTATCAACTCTTTAGGAGCCCGATTCAACTAGAGGAACATGTGGCA GAACCCGTTCTTCAAAATTAGTTCCGAGAGACATGCAGGGCTCTTTACTATTCATTCCAT TAAAATCAAAATATTAGCTAATGCCTCTTAAGCCGTCAGAGCGGGCCTGGTGACTCCTCT GATGCACTGTCCTACTTGAAAAGGAAGGAGGCCTTTCATGCTGAGGCCTCTGTCAAATCC CTCTGGTCTCCCGCTCACCCCATGACAAACCCTGACGTGCTGTGTCTGAGACACTTGTGG GCTTCGGACAAAGGCCCAGGGCCAGGAGGGCAAGGCTGCCTCTTCCTCAGCCCCACCCAG CACAAGCCCCCCACCTCCTTGGATCCCAGGATGGCCTCTGGCAGAGCAGGAAGGCCCCTC CCGGTCCCAGGAGCGACATTTCCTGTATCCAGAGCCAGAACTGATGTTGAAAGGGGTGAG GGGAGTGATGACTCAGGACCCTGAGGCTTAGAAATCAAAACTGCTTTGCATGTTTTCTTG GATTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTAAACCTTTTGTTATCAACTCTTTAGGAGCCCGATTCAACTAGAGGAACATGTGGCA GAACCCGTTCTTCAAAATTAGTTCCGAGAGACATGCAGGGCTCTTTACTATTCATTCCAT TAAAATCAAAATATTAGCTAATGCCTCTTAAGCCGTCAGAGCGGGCCTGGTGACTCCTCT GATGCACTGTCCTACTTGAAAAGGAAGGAGGCCTTTCATGCTGAGGCCTCTGTCAAATCC CTCTGGTCTCCCGCTCACCCCATGACAAACCCTGACGTGCTGTGTCTGAGACACTTGTGG GCTTCGGACAAAGGCCCAGGGCCAGGAGGGCAAGGCTGCCTCTTCCTCAGCCCCACCCAG CACAAGCCCCCCACCTCCTTGGATCCCAGGATGGCCTCTGGCAGAGCAGGAAGGCCCCTC CCGGTCCCAGGAGCGACATTTCCTGTATCCAGAGCCAGAACTGATGTTGAAAGGGGTGAG GGGAGTGATGACTCAGGACCCTGAGGCTTAGAAATCAAAACTGCTTTGCATGTTTTCTTG GATTC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 267-366, - strand, RNAz p=0.615253 | |
| 401-493, - strand, RNAz p=0.619635 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 267-366, - strand, RNAz p=0.615253 | |
| 401-493, - strand, RNAz p=0.619635 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 1-366, gnl|bosTau2|chr24 (37466448-37466083) | |
| 1-366, gnl|canFam2|chr7 (83410920-83410416) | |
| 1-366, gnl|dasNov1|scaffold_91309 (2203-1646) | |
| 1-366, gnl|hg17|chr18 (43958878-43959459) | |
| 1-366, gnl|Hg17|chr18 (43958895-43959286) | |
| 1-366, gnl|loxAfr1|scaffold_56238 (3721-4293) | |
| 1-366, gnl|mm7|chr18 (76414376-76413853) | |
| 1-366, gnl|Mm7|chr18 (76414367-76414037) | |
| 1-366, gnl|monDom2|scaffold_58 (7365848-7366510) | |
| 1-366, gnl|oryCun1|scaffold_214268 (39998-40537) | |
| 1-366, gnl|panTro1|chr17 (40326275-40326856) | |
| 1-366, gnl|rheMac2|chr18 (41216551-41217129) | |
| 1-366, gnl|rn3|chr18 (73042750-73042226) | |
| 374-545, gnl|bosTau2|chr24 (37466042-37465867) | |
| 374-545, gnl|canFam2|chr7 (83410920-83410416) | |
| 374-545, gnl|dasNov1|scaffold_91309 (2203-1646) | |
| 374-545, gnl|hg17|chr18 (43958878-43959459) | |
| 374-545, gnl|Hg17|chr18 (43959294-43959443) | |
| 374-545, gnl|loxAfr1|scaffold_56238 (3721-4293) | |
| 374-545, gnl|mm7|chr18 (76414376-76413853) | |
| 374-545, gnl|Mm7|chr18 (76414013-76413867) | |
| 374-545, gnl|monDom2|scaffold_58 (7365848-7366510) | |
| 374-545, gnl|oryCun1|scaffold_214268 (39998-40537) | |
| 374-545, gnl|panTro1|chr17 (40326275-40326856) | |
| 374-545, gnl|rheMac2|chr18 (41216551-41217129) | |
| 374-545, gnl|rn3|chr18 (73042750-73042226) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-366, gnl|bosTau2|chr24 (37466448-37466083) | |
| 1-366, gnl|canFam2|chr7 (83410920-83410416) | |
| 1-366, gnl|dasNov1|scaffold_91309 (2203-1646) | |
| 1-366, gnl|hg17|chr18 (43958878-43959459) | |
| 1-366, gnl|Hg17|chr18 (43958895-43959286) | |
| 1-366, gnl|loxAfr1|scaffold_56238 (3721-4293) | |
| 1-366, gnl|mm7|chr18 (76414376-76413853) | |
| 1-366, gnl|Mm7|chr18 (76414367-76414037) | |
| 1-366, gnl|monDom2|scaffold_58 (7365848-7366510) | |
| 1-366, gnl|oryCun1|scaffold_214268 (39998-40537) | |
| 1-366, gnl|panTro1|chr17 (40326275-40326856) | |
| 1-366, gnl|rheMac2|chr18 (41216551-41217129) | |
| 1-366, gnl|rn3|chr18 (73042750-73042226) | |
| 374-545, gnl|bosTau2|chr24 (37466042-37465867) | |
| 374-545, gnl|canFam2|chr7 (83410920-83410416) | |
| 374-545, gnl|dasNov1|scaffold_91309 (2203-1646) | |
| 374-545, gnl|hg17|chr18 (43958878-43959459) | |
| 374-545, gnl|Hg17|chr18 (43959294-43959443) | |
| 374-545, gnl|loxAfr1|scaffold_56238 (3721-4293) | |
| 374-545, gnl|mm7|chr18 (76414376-76413853) | |
| 374-545, gnl|Mm7|chr18 (76414013-76413867) | |
| 374-545, gnl|monDom2|scaffold_58 (7365848-7366510) | |
| 374-545, gnl|oryCun1|scaffold_214268 (39998-40537) | |
| 374-545, gnl|panTro1|chr17 (40326275-40326856) | |
| 374-545, gnl|rheMac2|chr18 (41216551-41217129) | |
| 374-545, gnl|rn3|chr18 (73042750-73042226) |