Lym2-sn60_H11.f
|
TCGCGATCTAGAACTAGTCGCAAACATAATTTTGCCATAATTCAGAGAATGTAGAGTATC
ATGGCGAACATCTGTGCATCATTTAGTTTTGGGAGATAATTTAGTCATATAGGGTTCAGA
TATTTTTTCATAACTTGTCAGAAATTGTAGATAAAATTAAAGTCACTGGAGTTGATTTCT
GTTTCATCACTTTAATGGATAGGGATCTTCCTCCAAGGATTGTTTCCTGGCCACAATGCT
AAAGGCTCTGAAATAGCAATTGTCACAGAATTTCTAATAGCTTCCTTTTCCAACCCTCAA
ACCAGTAATTTAAGAGTTATTTTATTTATGTAATTGGCCAATACACAGAAATCTTCCAAA
ACTGCAGCTGGCTCGGAAAATTACAATTTGGTCTTCCGTTGGCCTGGTTCTTTGGAGCAG
AGACTGATGTTTATCTTCCATCTTCCTCTTTCCATCTGGTTTTCCCTAATGGCTTTCAAT
TACTAATCTCTTCTGTGGGTGATAAGATGGAAGGGCAGATGAGATTCACGCAAACAATTC
CCTGGGCCCCTTTTGAGTTTTCATTAATCATTTCAAGCATGAGATTCTCTGATGGGGTCT
AGGTGGTCGTAACACGCAAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCGCGATCTAGAACTAGTCGCAAACATAATTTTGCCATAATTCAGAGAATGTAGAGTATC
ATGGCGAACATCTGTGCATCATTTAGTTTTGGGAGATAATTTAGTCATATAGGGTTCAGA
TATTTTTTCATAACTTGTCAGAAATTGTAGATAAAATTAAAGTCACTGGAGTTGATTTCT
GTTTCATCACTTTAATGGATAGGGATCTTCCTCCAAGGATTGTTTCCTGGCCACAATGCT
AAAGGCTCTGAAATAGCAATTGTCACAGAATTTCTAATAGCTTCCTTTTCCAACCCTCAA
ACCAGTAATTTAAGAGTTATTTTATTTATGTAATTGGCCAATACACAGAAATCTTCCAAA
ACTGCAGCTGGCTCGGAAAATTACAATTTGGTCTTCCGTTGGCCTGGTTCTTTGGAGCAG
AGACTGATGTTTATCTTCCATCTTCCTCTTTCCATCTGGTTTTCCCTAATGGCTTTCAAT
TACTAATCTCTTCTGTGGGTGATAAGATGGAAGGGCAGATGAGATTCACGCAAACAATTC
CCTGGGCCCCTTTTGAGTTTTCATTAATCATTTCAAGCATGAGATTCTCTGATGGGGTCT
AGGTGGTCGTAACACGCAAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
422-546, + strand, RNAmicro p=0.991497 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
422-546, + strand, RNAmicro p=0.991497 |
|
162-615, gnl|bosTau2|chr2 (14859468-14859925) |
|
162-615, gnl|canFam2|chr36 (21886138-21886488) |
|
162-615, gnl|dasNov1|scaffold_4066 (80885-80508) |
|
162-615, gnl|echTel1|scaffold_162516 (3079-3460) |
|
162-615, gnl|hg17|chr2 (175560908-175561277) |
|
162-615, gnl|Hg17|chr2 (175560933-175561381) |
|
162-615, gnl|monDom2|scaffold_2 (74563887-74564229) |
|
162-615, gnl|oryCun1|scaffold_202940 (40049-40410) |
|
162-615, gnl|panTro1|chr13 (65195572-65195941) |
|
162-615, gnl|rheMac2|chr12 (38496884-38497242) |
|
162-615, gnl|rn3|chr3 (56098353-56098715) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
162-615, gnl|bosTau2|chr2 (14859468-14859925) |
|
162-615, gnl|canFam2|chr36 (21886138-21886488) |
|
162-615, gnl|dasNov1|scaffold_4066 (80885-80508) |
|
162-615, gnl|echTel1|scaffold_162516 (3079-3460) |
|
162-615, gnl|hg17|chr2 (175560908-175561277) |
|
162-615, gnl|Hg17|chr2 (175560933-175561381) |
|
162-615, gnl|monDom2|scaffold_2 (74563887-74564229) |
|
162-615, gnl|oryCun1|scaffold_202940 (40049-40410) |
|
162-615, gnl|panTro1|chr13 (65195572-65195941) |
|
162-615, gnl|rheMac2|chr12 (38496884-38497242) |
|
162-615, gnl|rn3|chr3 (56098353-56098715) |
