Lym2-sn75_A07.f
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGCGATCTAGAACTAGTCTCTACAATGATTTTAGTCCTTAAGGATTTTTCTCCCTAGAG TCTACTCCTGTCTCTGAATCCTTTGACCCTCACCTTGTTAACCTCGGGGCGCGAGGTGGT GTGCCATGCCTCTGCCTGGGACTTCTACAACAGGAAAGACTTCAGGATCAAGCAGTGCAC GCAGGTCACCATGGACCAGCTGTCCACCGTGCACCACGAGATGGGCCACGTGCAGTACTA CCTGCAGTACAAGGACCAGCATGTCTCCCTGCGCCGAGGCGCCAACCCTGGCTTCCATGA GGCCATCGGGGATGTGCTGGCGCTCTCCGTCTCCACTCCTGCACATCTGCACAAAATCGG CCTGCTGGACCATGTCACCAGTGACTGGGAAAGTGACATCAATTACTTGTTAAAGATGGC ACTGGAAAAGATCGCCTTCCTGCCCTTTGGCTACTTGGTGGACCAGTGGCGTTGGGGGGT CTTTAGTGGGCGTACCCCCCCTTCCCTCTACAACTATGACTGGTGGTACCTTCGAACCAA GTATCAGGGGGTCTGCCCTCCTGTTGTCCGAAACGAAACCCATTTTGATGCTGGAGCCAA GTATCATGTCCCAAATGTGACCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGCGATCTAGAACTAGTCTCTACAATGATTTTAGTCCTTAAGGATTTTTCTCCCTAGAG TCTACTCCTGTCTCTGAATCCTTTGACCCTCACCTTGTTAACCTCGGGGCGCGAGGTGGT GTGCCATGCCTCTGCCTGGGACTTCTACAACAGGAAAGACTTCAGGATCAAGCAGTGCAC GCAGGTCACCATGGACCAGCTGTCCACCGTGCACCACGAGATGGGCCACGTGCAGTACTA CCTGCAGTACAAGGACCAGCATGTCTCCCTGCGCCGAGGCGCCAACCCTGGCTTCCATGA GGCCATCGGGGATGTGCTGGCGCTCTCCGTCTCCACTCCTGCACATCTGCACAAAATCGG CCTGCTGGACCATGTCACCAGTGACTGGGAAAGTGACATCAATTACTTGTTAAAGATGGC ACTGGAAAAGATCGCCTTCCTGCCCTTTGGCTACTTGGTGGACCAGTGGCGTTGGGGGGT CTTTAGTGGGCGTACCCCCCCTTCCCTCTACAACTATGACTGGTGGTACCTTCGAACCAA GTATCAGGGGGTCTGCCCTCCTGTTGTCCGAAACGAAACCCATTTTGATGCTGGAGCCAA GTATCATGTCCCAAATGTGACCCCC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 202-361, + strand, RNAz p=0.742265 | |
| 389-507, - strand, RNAz p=0.858552 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 202-361, + strand, RNAz p=0.742265 | |
| 389-507, - strand, RNAz p=0.858552 |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 163-385, gnl|bosTau2|chr19 (40227413-40227635) | |
| 163-385, gnl|canFam2|chr9 (14628121-14628325) | |
| 163-385, gnl|danRer3|chr3 (17191114-17191318) | |
| 163-385, gnl|echTel1|scaffold_320855 (31512-31716) | |
| 163-385, gnl|fr1|chrUn (192402096-192401892) | |
| 163-385, gnl|galGal2|chr27 (1115692-1115896) | |
| 163-385, gnl|hg17|chr17 (58913557-58913761) | |
| 163-385, gnl|Hg17|chr17 (58913556-58913778) | |
| 163-385, gnl|loxAfr1|scaffold_29461 (17956-17752) | |
| 163-385, gnl|mm7|chr11 (106081900-106082104) | |
| 163-385, gnl|Mm7|chr11 (106081899-106082121) | |
| 163-385, gnl|monDom2|scaffold_18 (36093635-36093431) | |
| 163-385, gnl|oryCun1|scaffold_205422 (69187-69391) | |
| 163-385, gnl|panTro1|chr19 (46224844-46224640) | |
| 163-385, gnl|rheMac2|chr16 (59002792-59002996) | |
| 163-385, gnl|rn3|chr10 (95380558-95380762) | |
| 163-385, gnl|tetNig1|chr2 (4287839-4287636) | |
| 163-385, gnl|xenTro1|scaffold_127 (243218-243014) | |
| 389-534, gnl|bosTau2|chr19 (40227951-40228096) | |
| 389-534, gnl|canFam2|chr9 (14628685-14628785) | |
| 389-534, gnl|danRer3|chr3 (17191411-17191511) | |
| 389-534, gnl|dasNov1|scaffold_89855 (7404-7305) | |
| 389-534, gnl|echTel1|scaffold_320855 (31963-32063) | |
| 389-534, gnl|fr1|chrUn (192401786-192401690) | |
| 389-534, gnl|galGal2|chr27 (1117513-1117613) | |
| 389-534, gnl|hg17|chr17 (58914117-58914217) | |
| 389-534, gnl|Hg17|chr17 (58914121-58914266) | |
| 389-534, gnl|loxAfr1|scaffold_29461 (17454-17349) | |
| 389-534, gnl|mm7|chr11 (106082428-106082528) | |
| 389-534, gnl|Mm7|chr11 (106082432-106082577) | |
| 389-534, gnl|oryCun1|scaffold_205422 (69715-69815) | |
| 389-534, gnl|panTro1|chr19 (46224284-46224184) | |
| 389-534, gnl|rheMac2|chr16 (59003357-59003457) | |
| 389-534, gnl|rn3|chr10 (95381072-95381172) | |
| 389-534, gnl|tetNig1|chr2 (4287537-4287440) | |
| 389-534, gnl|xenTro1|scaffold_127 (242575-242475) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 163-385, gnl|bosTau2|chr19 (40227413-40227635) | |
| 163-385, gnl|canFam2|chr9 (14628121-14628325) | |
| 163-385, gnl|danRer3|chr3 (17191114-17191318) | |
| 163-385, gnl|echTel1|scaffold_320855 (31512-31716) | |
| 163-385, gnl|fr1|chrUn (192402096-192401892) | |
| 163-385, gnl|galGal2|chr27 (1115692-1115896) | |
| 163-385, gnl|hg17|chr17 (58913557-58913761) | |
| 163-385, gnl|Hg17|chr17 (58913556-58913778) | |
| 163-385, gnl|loxAfr1|scaffold_29461 (17956-17752) | |
| 163-385, gnl|mm7|chr11 (106081900-106082104) | |
| 163-385, gnl|Mm7|chr11 (106081899-106082121) | |
| 163-385, gnl|monDom2|scaffold_18 (36093635-36093431) | |
| 163-385, gnl|oryCun1|scaffold_205422 (69187-69391) | |
| 163-385, gnl|panTro1|chr19 (46224844-46224640) | |
| 163-385, gnl|rheMac2|chr16 (59002792-59002996) | |
| 163-385, gnl|rn3|chr10 (95380558-95380762) | |
| 163-385, gnl|tetNig1|chr2 (4287839-4287636) | |
| 163-385, gnl|xenTro1|scaffold_127 (243218-243014) | |
| 389-534, gnl|bosTau2|chr19 (40227951-40228096) | |
| 389-534, gnl|canFam2|chr9 (14628685-14628785) | |
| 389-534, gnl|danRer3|chr3 (17191411-17191511) | |
| 389-534, gnl|dasNov1|scaffold_89855 (7404-7305) | |
| 389-534, gnl|echTel1|scaffold_320855 (31963-32063) | |
| 389-534, gnl|fr1|chrUn (192401786-192401690) | |
| 389-534, gnl|galGal2|chr27 (1117513-1117613) | |
| 389-534, gnl|hg17|chr17 (58914117-58914217) | |
| 389-534, gnl|Hg17|chr17 (58914121-58914266) | |
| 389-534, gnl|loxAfr1|scaffold_29461 (17454-17349) | |
| 389-534, gnl|mm7|chr11 (106082428-106082528) | |
| 389-534, gnl|Mm7|chr11 (106082432-106082577) | |
| 389-534, gnl|oryCun1|scaffold_205422 (69715-69815) | |
| 389-534, gnl|panTro1|chr19 (46224284-46224184) | |
| 389-534, gnl|rheMac2|chr16 (59003357-59003457) | |
| 389-534, gnl|rn3|chr10 (95381072-95381172) | |
| 389-534, gnl|tetNig1|chr2 (4287537-4287440) | |
| 389-534, gnl|xenTro1|scaffold_127 (242575-242475) |