Non-Coding RNA Search

MPL-MPL384_4_J23

Sequence:


               
               CGCGTCCGCAAATATTTACGGAGGTGCAAGCAGGCACCCAGCTAACTGCAGGTGGGGAAT
AGCATGCTGACAGATGGGCCGGGCAGTCTCATGAACCTCAAAAGCGAAGCTGGGGCCTCG
GGTCTCCAGGTGTGCAGCAGTTATGTGGGGTGGACTCTCGGGGTGCATGCAGGTCAAGCC
ACGGTGAGCAAGCTGGAGCTCCANCTCCACGAGACCAGTGCTGCAGAGTGTGTCCCTTTT
CTGTTGCCAGCCCCTCACCTCTCTTTCTTGCCGACTCCGAGTCGGTGGGAAAAAGATAAA
AATTGCCTGGGTTGGCGCACTTGGAGGGAGGTTCGAGCAAGGTGTTTAATAGCTAGGGTT
GGAATTCAATTTTGAATTCTCCTGCTGTGGCAGTTAAATGTGAGGCTTCATATTACCATT
CCTCTTTTATTCTTCTCAGCTATATTTTTACTAAAATAAAAAAAAAAAATCCCCGCTGGT
TATGAAGGCAACCAAATGTAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGTCCGCAAATATTTACGGAGGTGCAAGCAGGCACCCAGCTAACTGCAGGTGGGGAAT
AGCATGCTGACAGATGGGCCGGGCAGTCTCATGAACCTCAAAAGCGAAGCTGGGGCCTCG
GGTCTCCAGGTGTGCAGCAGTTATGTGGGGTGGACTCTCGGGGTGCATGCAGGTCAAGCC
ACGGTGAGCAAGCTGGAGCTCCANCTCCACGAGACCAGTGCTGCAGAGTGTGTCCCTTTT
CTGTTGCCAGCCCCTCACCTCTCTTTCTTGCCGACTCCGAGTCGGTGGGAAAAAGATAAA
AATTGCCTGGGTTGGCGCACTTGGAGGGAGGTTCGAGCAAGGTGTTTAATAGCTAGGGTT
GGAATTCAATTTTGAATTCTCCTGCTGTGGCAGTTAAATGTGAGGCTTCATATTACCATT
CCTCTTTTATTCTTCTCAGCTATATTTTTACTAAAATAAAAAAAAAAAATCCCCGCTGGT
TATGAAGGCAACCAAATGTAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               320-439, - strand, RNAz p=0.850824

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               320-439, - strand, RNAz p=0.850824

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-507, gnl|bosTau2|chr9 (60432863-60432359)
               

               
               9-507, gnl|Hg17|chr6 (162287237-162286503)
               

               
               9-507, gnl|Mm7|chr17 (10275958-10276443)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-507, gnl|bosTau2|chr9 (60432863-60432359)
               

               
               9-507, gnl|Hg17|chr6 (162287237-162286503)
               

               
               9-507, gnl|Mm7|chr17 (10275958-10276443)

	9-507, gnl\|bosTau2\|chr9 (60432863-60432359)
	9-507, gnl\|Hg17\|chr6 (162287237-162286503)
	9-507, gnl\|Mm7\|chr17 (10275958-10276443)