Non-Coding RNA Search

MPL-MPL384_8_M10

Sequence:


               
               CCCGGGTCGACCCACGCGTCCGACTCTTTTGAAAATATAGATTCTAAGCAAATAGGCAGT
TATATGAAAAAAAAAAAAGAGAAAAAGCCTATATCCTGCAGAGTTCCTATGTCAGTTCCT
GGCATTGCAGTTTTGTTTCTGTATATGTGAATATGATGCTATAATGTATTGATGCTGGTT
TTCATAATATATTTAACCAAGTGATGCACTTTATGATAATTAAACTCTTTTGTGCCAACT
TTAATTGGTGAATTTCTTTAGTAAGTGGAGTTAGGAAAAAGATGTAGTGCCTTCACTATT
TCACTTTTTACAGAGGTCTCTTTAGGGCCTGTGTGTCTGCTTTATGAAAAAAAAATGTTT
ATTTTAGCTTTGCATATAGTTGTTGAAAGTGCCTTGTTTCATTTTTATAGTATGAAGTTA
TTCGTTTAATTTGTGTTTCTACTGTTTTGCATATTGCTATGAATAACATTGTAATCATGC
TAGCATTTTGAAATCACAGTTGATATACTGAACTACATGTGCTTTCTAAAAACTGAAGGG
AACTTATTAGAGAAGTGAAATGACAATCTCCGTTTTTTTCTTCACTATCTAAAAATTTAG
TATCTTGATATACATATTAAGATATGGTGGTTAAAATTCTACTGACATAAACTAATAGAT
ACTATGGCTTTTGTTAAGCTTTGATCTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGGGTCGACCCACGCGTCCGACTCTTTTGAAAATATAGATTCTAAGCAAATAGGCAGT
TATATGAAAAAAAAAAAAGAGAAAAAGCCTATATCCTGCAGAGTTCCTATGTCAGTTCCT
GGCATTGCAGTTTTGTTTCTGTATATGTGAATATGATGCTATAATGTATTGATGCTGGTT
TTCATAATATATTTAACCAAGTGATGCACTTTATGATAATTAAACTCTTTTGTGCCAACT
TTAATTGGTGAATTTCTTTAGTAAGTGGAGTTAGGAAAAAGATGTAGTGCCTTCACTATT
TCACTTTTTACAGAGGTCTCTTTAGGGCCTGTGTGTCTGCTTTATGAAAAAAAAATGTTT
ATTTTAGCTTTGCATATAGTTGTTGAAAGTGCCTTGTTTCATTTTTATAGTATGAAGTTA
TTCGTTTAATTTGTGTTTCTACTGTTTTGCATATTGCTATGAATAACATTGTAATCATGC
TAGCATTTTGAAATCACAGTTGATATACTGAACTACATGTGCTTTCTAAAAACTGAAGGG
AACTTATTAGAGAAGTGAAATGACAATCTCCGTTTTTTTCTTCACTATCTAAAAATTTAG
TATCTTGATATACATATTAAGATATGGTGGTTAAAATTCTACTGACATAAACTAATAGAT
ACTATGGCTTTTGTTAAGCTTTGATCTAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               522-633, + strand, RNAz p=0.983205

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               522-633, + strand, RNAz p=0.983205

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_152837, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_152837, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-687, gnl|bosTau2|chr14 (49878248-49878918)
               

               
               23-687, gnl|Hg17|chr8 (82875506-82874843)
               

               
               23-687, gnl|Mm7|chr3 (10426553-10425899)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-687, gnl|bosTau2|chr14 (49878248-49878918)
               

               
               23-687, gnl|Hg17|chr8 (82875506-82874843)
               

               
               23-687, gnl|Mm7|chr3 (10426553-10425899)

	23-687, gnl\|bosTau2\|chr14 (49878248-49878918)
	23-687, gnl\|Hg17\|chr8 (82875506-82874843)
	23-687, gnl\|Mm7\|chr3 (10426553-10425899)