Non-Coding RNA Search

Mixc-0025j02

Sequence:


               
               TATATGCCGTAGGGGTAACCTTTTTACTAGCAAGTCTATAGTCTCAGCTGTTGGCAATGG
TGACTTTGCCATAGTGCGAAGTATTTTTTTTCCCATTAACTCTCTTTATTGGTACAACCT
AACCTGAATAGGTAGTTGTTTTTTTGTTTTGTTTTTCTTTTGTAGAGATATTACTAGCTG
GCAAATTTACTGGCTGTCTTAGATTTTGCGATAGGGAAGAGTTAAAACACTCTTTGGAAC
TGAAAAGACTAAAGTTTGTAGAGGTGATTGAGAAAGCCATATTTCATGGCATTTAAATAC
GTCAGATCTCTAAACTGATGGTTCTTTTGGATATATTTTGGACTTATAGTCTTGCTGGAC
TTCTGCATGTGCAAGAACTGTAAGGCCCCAATTTTGATTTGTCTTGCTTGCCAGTTTATA
ATGTTGACTTAAAATGGCTTTCTTGTCATTTGACCAACCTCATTGTTTACTGTACCGTCT
GTAGATTTTCTGACCATCATCATGACTCAATGTCTTGTCTATTGTATTGGTTACTGACTT
ACTCCGAAACAAAAATTTTATTGTAACACTCTTGAGTTTTCTTCCTTTATTTCACAAGCT
CGTCCAAGATTTACTGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATATGCCGTAGGGGTAACCTTTTTACTAGCAAGTCTATAGTCTCAGCTGTTGGCAATGG
TGACTTTGCCATAGTGCGAAGTATTTTTTTTCCCATTAACTCTCTTTATTGGTACAACCT
AACCTGAATAGGTAGTTGTTTTTTTGTTTTGTTTTTCTTTTGTAGAGATATTACTAGCTG
GCAAATTTACTGGCTGTCTTAGATTTTGCGATAGGGAAGAGTTAAAACACTCTTTGGAAC
TGAAAAGACTAAAGTTTGTAGAGGTGATTGAGAAAGCCATATTTCATGGCATTTAAATAC
GTCAGATCTCTAAACTGATGGTTCTTTTGGATATATTTTGGACTTATAGTCTTGCTGGAC
TTCTGCATGTGCAAGAACTGTAAGGCCCCAATTTTGATTTGTCTTGCTTGCCAGTTTATA
ATGTTGACTTAAAATGGCTTTCTTGTCATTTGACCAACCTCATTGTTTACTGTACCGTCT
GTAGATTTTCTGACCATCATCATGACTCAATGTCTTGTCTATTGTATTGGTTACTGACTT
ACTCCGAAACAAAAATTTTATTGTAACACTCTTGAGTTTTCTTCCTTTATTTCACAAGCT
CGTCCAAGATTTACTGAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               280-397, + strand, RNAz p=0.692391

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               280-397, + strand, RNAz p=0.692391

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of BC019341, +

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of BC019341, +

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-620, gnl|bosTau2|chr7 (32433857-32433236)
               

               
               1-620, gnl|Hg17|chr5 (134056743-134057337)
               

               
               1-620, gnl|Mm7|chr11 (51673988-51673381)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-620, gnl|bosTau2|chr7 (32433857-32433236)
               

               
               1-620, gnl|Hg17|chr5 (134056743-134057337)
               

               
               1-620, gnl|Mm7|chr11 (51673988-51673381)

	1-620, gnl\|bosTau2\|chr7 (32433857-32433236)
	1-620, gnl\|Hg17\|chr5 (134056743-134057337)
	1-620, gnl\|Mm7\|chr11 (51673988-51673381)