Non-Coding RNA Search

Mixc-0029,b17

Sequence:


               
               GGCCCCCAGACTCGTCATCCTGGCTGGGGCCCCCTTTGTTGAGATCCCGGGAGAACACTA
GGCCCTCGGTTTCTGAGTCGCTTTTGTCTCGGTCGAGCTCAGGCAGGCTGCGGGAGAAGT
CTTCGAAGGCGCTGCCGTGGTAGTCGCCAATGACCGTGAAGTCGACCTCGGCCTCCAGGC
TGGATGTGGAGCTGACCGTGATGCTGGAGCACTTACGCTCAATGGCCAGGTGGTTGTCCT
TCAGGAACACCGCGTCCCTCTCCTGGTCCTGGTCCTCGTCTCCCGTGTCACTCTCTGGGG
CCCTGGGACGTGGCGGTTTGACTTTCTCCTCGGAGCCCTCCCTCAGCCCTGCTCTCTATG
GCCAGGTAAAATCAAAGGAGTGGGGGCGTGGGGTGGGAGAGAGAGAGAAAGAGAGAAATC
AAGATGGTGAATGACAGAAGAAATCTTGGAGCCGTTCGATGCCCCAGTGGAAGAGTAGGT
CAGGAAAAGAAAAATACCCCCAGAAAGGTCCCTCGACATAATAAGCTTTAAAAAACCGAA
AACTTCTCAAGAGTGAGGATGCTCCTTTCCAAGGGTCTCCCGCTAATGGCAAAAGCAAGT
ACAAAACAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCCCCAGACTCGTCATCCTGGCTGGGGCCCCCTTTGTTGAGATCCCGGGAGAACACTA
GGCCCTCGGTTTCTGAGTCGCTTTTGTCTCGGTCGAGCTCAGGCAGGCTGCGGGAGAAGT
CTTCGAAGGCGCTGCCGTGGTAGTCGCCAATGACCGTGAAGTCGACCTCGGCCTCCAGGC
TGGATGTGGAGCTGACCGTGATGCTGGAGCACTTACGCTCAATGGCCAGGTGGTTGTCCT
TCAGGAACACCGCGTCCCTCTCCTGGTCCTGGTCCTCGTCTCCCGTGTCACTCTCTGGGG
CCCTGGGACGTGGCGGTTTGACTTTCTCCTCGGAGCCCTCCCTCAGCCCTGCTCTCTATG
GCCAGGTAAAATCAAAGGAGTGGGGGCGTGGGGTGGGAGAGAGAGAGAAAGAGAGAAATC
AAGATGGTGAATGACAGAAGAAATCTTGGAGCCGTTCGATGCCCCAGTGGAAGAGTAGGT
CAGGAAAAGAAAAATACCCCCAGAAAGGTCCCTCGACATAATAAGCTTTAAAAAACCGAA
AACTTCTCAAGAGTGAGGATGCTCCTTTCCAAGGGTCTCCCGCTAATGGCAAAAGCAAGT
ACAAAACAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               321-428, + strand, RNAz p=0.589546

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               321-428, + strand, RNAz p=0.589546

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-542, gnl|bosTau2|chr13 (44348074-44347518)
               

               
               1-542, gnl|Hg17|chr20 (34261178-34260633)
               

               
               1-542, gnl|Mm7|chr2 (156266090-156265562)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-542, gnl|bosTau2|chr13 (44348074-44347518)
               

               
               1-542, gnl|Hg17|chr20 (34261178-34260633)
               

               
               1-542, gnl|Mm7|chr2 (156266090-156265562)

	1-542, gnl\|bosTau2\|chr13 (44348074-44347518)
	1-542, gnl\|Hg17\|chr20 (34261178-34260633)
	1-542, gnl\|Mm7\|chr2 (156266090-156265562)