Non-Coding RNA Search

Mixc-0029,f13

Sequence:


               
               GAAGTAGGGAGACTGGTCATGAGGTTGCTGTCATTGTCTAGACAATGGGTGATGGTGGTT
TGACCTAGGAGATAGTAGTGGGGACGGCAGGTAGGCAGATTTGATGTGTATTTTGGAGGC
AGACCTACCTGCCTTGATTGGATGTGGAGGTTACAGCGACTGAAATTCACAGAACCTAAG
AGCTGGGATGGTGTTTAAGAGACCATCCCATCCAGGTGTCATCTTCTAGGTAAGGAAGCT
GCCACCCAGGAGATGGGTGAGGCTGACTTAATCACAGATCCATAGCTAGTCTGTGAAGGT
CTAGTCTGAAACTCAGACCTGATTTGAAGTTTAATGTCATTTGAACTCCTTTATCACAAG
TCAACAAACGTCTTCATTCTATAAATGCATGCTCTTTTATTTTTGTTTTGTATACGCACA
ATTGTCTGTTAAATGAAGAGAAAGTGATTTTTTTAAACTGGTACCCTAACCAGCTTTGAA
ATGCTCGGTGTTGCCCTCCTGCCACCTTGTGGCGATTTCTGTTACTGCAGGGAAGAAGAA
GTTTTCTAATCTTCCCAGAAGAGTTCTTAAGTTTACTCAGGAGCCCTCTTAAGATGCTTT
CTGTGGCAGGATACAAAAAGACAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGTAGGGAGACTGGTCATGAGGTTGCTGTCATTGTCTAGACAATGGGTGATGGTGGTT
TGACCTAGGAGATAGTAGTGGGGACGGCAGGTAGGCAGATTTGATGTGTATTTTGGAGGC
AGACCTACCTGCCTTGATTGGATGTGGAGGTTACAGCGACTGAAATTCACAGAACCTAAG
AGCTGGGATGGTGTTTAAGAGACCATCCCATCCAGGTGTCATCTTCTAGGTAAGGAAGCT
GCCACCCAGGAGATGGGTGAGGCTGACTTAATCACAGATCCATAGCTAGTCTGTGAAGGT
CTAGTCTGAAACTCAGACCTGATTTGAAGTTTAATGTCATTTGAACTCCTTTATCACAAG
TCAACAAACGTCTTCATTCTATAAATGCATGCTCTTTTATTTTTGTTTTGTATACGCACA
ATTGTCTGTTAAATGAAGAGAAAGTGATTTTTTTAAACTGGTACCCTAACCAGCTTTGAA
ATGCTCGGTGTTGCCCTCCTGCCACCTTGTGGCGATTTCTGTTACTGCAGGGAAGAAGAA
GTTTTCTAATCTTCCCAGAAGAGTTCTTAAGTTTACTCAGGAGCCCTCTTAAGATGCTTT
CTGTGGCAGGATACAAAAAGACAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               80-192, - strand, RNAz p=0.976782

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-192, - strand, RNAz p=0.976782

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-565, gnl|bosTau2|chr25 (33059082-33058504)
               

               
               1-565, gnl|Hg17|chr7 (99156444-99155527)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-565, gnl|bosTau2|chr25 (33059082-33058504)
               

               
               1-565, gnl|Hg17|chr7 (99156444-99155527)

	1-565, gnl\|bosTau2\|chr25 (33059082-33058504)
	1-565, gnl\|Hg17\|chr7 (99156444-99155527)