Mixc-0029f21
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCATCGTTACTGCATATTTTTTTGGCTCCTTATTAGTGGACTGTGGTGTCTTCCTTTTA TGTTTGCACTTTTGTCTCTTTCTAAGATGCAATGGTTTAAACAGCTTGCTTTGCTTTCTT TTAATTTGAAATTATTGTCCAAAATTCACATTTCACAAGCTTCTCTGCAGTCGGGGAGAG GATTCAGTTAGTAACTAACTATGTATGAAAAGTACGATGATTTTTTTCCCCAAGACTTTT GTTGATTCCATTTGGGGATATACTGAGGGATACTTGTGGATTGAGTGTGGGATGTTGGAC TGACCTATACACTTTTTCTTTAGTAAATCAATTGATTCAATCATTTATGATACTAACATG GTTGATTAGTAAGCAGATGAGAGAAGACGATGTCAGTGTAGCTGCCAGGACTTTTTTTCC TTCCATTTTAGCTGGATTTCTAGGCCTGTACTCAAATCCCGTTTAATTCTGATTTTTTTC AGTATGTATAGCTTATCTCACTTTTGAACATCTCCAGGTAAAATCACTAGTGGTATACTT GTTCATACAAGTAAAATTTTTGCCATTATTTCAAATACTTTTTATTCTTACATTCTTTAC TAGATGCTTTAAAAAGGTAAATTTGGGAGCTTCTTGGTATAGTGGGGGAAAGTGTAGTCA GTTCATTCAACTCCACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCATCGTTACTGCATATTTTTTTGGCTCCTTATTAGTGGACTGTGGTGTCTTCCTTTTA TGTTTGCACTTTTGTCTCTTTCTAAGATGCAATGGTTTAAACAGCTTGCTTTGCTTTCTT TTAATTTGAAATTATTGTCCAAAATTCACATTTCACAAGCTTCTCTGCAGTCGGGGAGAG GATTCAGTTAGTAACTAACTATGTATGAAAAGTACGATGATTTTTTTCCCCAAGACTTTT GTTGATTCCATTTGGGGATATACTGAGGGATACTTGTGGATTGAGTGTGGGATGTTGGAC TGACCTATACACTTTTTCTTTAGTAAATCAATTGATTCAATCATTTATGATACTAACATG GTTGATTAGTAAGCAGATGAGAGAAGACGATGTCAGTGTAGCTGCCAGGACTTTTTTTCC TTCCATTTTAGCTGGATTTCTAGGCCTGTACTCAAATCCCGTTTAATTCTGATTTTTTTC AGTATGTATAGCTTATCTCACTTTTGAACATCTCCAGGTAAAATCACTAGTGGTATACTT GTTCATACAAGTAAAATTTTTGCCATTATTTCAAATACTTTTTATTCTTACATTCTTTAC TAGATGCTTTAAAAAGGTAAATTTGGGAGCTTCTTGGTATAGTGGGGGAAAGTGTAGTCA GTTCATTCAACTCCACA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 464-571, - strand, RNAz p=0.87752 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 464-571, - strand, RNAz p=0.87752 |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 3-164, gnl|bosTau2|chr2 (69057128-69057289) | |
| 3-164, gnl|canFam2|chr25 (43131402-43131580) | |
| 3-164, gnl|danRer3|chrNA (116720370-116720183) | |
| 3-164, gnl|echTel1|scaffold_302794 (35296-35460) | |
| 3-164, gnl|galGal2|chr9 (4214810-4214652) | |
| 3-164, gnl|hg17|chr2 (228037629-228037809) | |
| 3-164, gnl|Hg17|chr2 (228037631-228037795) | |
| 3-164, gnl|loxAfr1|scaffold_13566 (13299-13468) | |
| 3-164, gnl|mm7|chr1 (82950684-82950859) | |
| 3-164, gnl|Mm7|chr1 (82950686-82950847) | |
| 3-164, gnl|monDom2|scaffold_28 (8842204-8842403) | |
| 3-164, gnl|panTro1|chr13 (118637202-118637382) | |
| 3-164, gnl|rheMac2|chr12 (91238050-91238230) | |
| 3-164, gnl|rn3|chr9 (82244038-82244212) | |
| 242-418, gnl|bosTau2|chr2 (69057409-69057579) | |
| 242-418, gnl|Hg17|chr2 (228037879-228038047) | |
| 242-418, gnl|Mm7|chr1 (82950939-82951096) | |
| 464-673, gnl|bosTau2|chr2 (69057661-69057883) | |
| 464-673, gnl|canFam2|chr25 (43131792-43132053) | |
| 464-673, gnl|dasNov1|scaffold_245914 (4136-3893) | |
| 464-673, gnl|echTel1|scaffold_302794 (35847-36080) | |
| 464-673, gnl|hg17|chr2 (228038001-228038261) | |
| 464-673, gnl|Hg17|chr2 (228038118-228038337) | |
| 464-673, gnl|loxAfr1|scaffold_13566 (13672-13933) | |
| 464-673, gnl|mm7|chr1 (82951059-82951310) | |
| 464-673, gnl|Mm7|chr1 (82951162-82951387) | |
| 464-673, gnl|oryCun1|scaffold_208611 (55737-55484) | |
| 464-673, gnl|panTro1|chr13 (118637578-118637838) | |
| 464-673, gnl|rheMac2|chr12 (91238419-91238679) | |
| 464-673, gnl|rn3|chr9 (82244426-82244676) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-164, gnl|bosTau2|chr2 (69057128-69057289) | |
| 3-164, gnl|canFam2|chr25 (43131402-43131580) | |
| 3-164, gnl|danRer3|chrNA (116720370-116720183) | |
| 3-164, gnl|echTel1|scaffold_302794 (35296-35460) | |
| 3-164, gnl|galGal2|chr9 (4214810-4214652) | |
| 3-164, gnl|hg17|chr2 (228037629-228037809) | |
| 3-164, gnl|Hg17|chr2 (228037631-228037795) | |
| 3-164, gnl|loxAfr1|scaffold_13566 (13299-13468) | |
| 3-164, gnl|mm7|chr1 (82950684-82950859) | |
| 3-164, gnl|Mm7|chr1 (82950686-82950847) | |
| 3-164, gnl|monDom2|scaffold_28 (8842204-8842403) | |
| 3-164, gnl|panTro1|chr13 (118637202-118637382) | |
| 3-164, gnl|rheMac2|chr12 (91238050-91238230) | |
| 3-164, gnl|rn3|chr9 (82244038-82244212) | |
| 242-418, gnl|bosTau2|chr2 (69057409-69057579) | |
| 242-418, gnl|Hg17|chr2 (228037879-228038047) | |
| 242-418, gnl|Mm7|chr1 (82950939-82951096) | |
| 464-673, gnl|bosTau2|chr2 (69057661-69057883) | |
| 464-673, gnl|canFam2|chr25 (43131792-43132053) | |
| 464-673, gnl|dasNov1|scaffold_245914 (4136-3893) | |
| 464-673, gnl|echTel1|scaffold_302794 (35847-36080) | |
| 464-673, gnl|hg17|chr2 (228038001-228038261) | |
| 464-673, gnl|Hg17|chr2 (228038118-228038337) | |
| 464-673, gnl|loxAfr1|scaffold_13566 (13672-13933) | |
| 464-673, gnl|mm7|chr1 (82951059-82951310) | |
| 464-673, gnl|Mm7|chr1 (82951162-82951387) | |
| 464-673, gnl|oryCun1|scaffold_208611 (55737-55484) | |
| 464-673, gnl|panTro1|chr13 (118637578-118637838) | |
| 464-673, gnl|rheMac2|chr12 (91238419-91238679) | |
| 464-673, gnl|rn3|chr9 (82244426-82244676) |