Mixc-0029m14
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGACGTGTATAATTCACCATCCTCCGTGACAGCAGCACTATGTCTGTATCCAGCTGACAC ACAAACAACTACCTTTCCCTGCAGAGGGCCCTGAATAAGCTTGGGATATTTCTGTGTTGA ACTATTTCCATGTCCCAGTTTCCCATAATCGCCATCTCCCCAACTGAAGACTTCTCCTTC TGTTGTGAAAGCTAAAGTATGACCATCAGATCCTTTAGAAGATGAGACCTTTTTAATGGA TCTATGAGGCTCAAACGTTAACTTTTTTAAAGTAGACTGATTATTAGAATCTCCAAGGCC CAGTCTCCCATAGCTGCCTTTACCACAAGCTCTGACAGAGCCATCTGTAGAAATGACAAA AGTGCAGTACTGTCCAGCTTCAATAGTCTGAGCATCAGAGAAACTAGGGGCCAGTTTGGG TTGCAGTATTTTTTCCTGTGTGCCTTCTACCAACTGATGGCTGCTGTTGCTACCCCAAAC ATAAACCTCACAGGTTTCTGAGACAATGGGAGCATCACCAGTCTGAATGCTATCTGGGCT AGCACATGTTCTTGAGTAATCAGAAGCCATTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGACGTGTATAATTCACCATCCTCCGTGACAGCAGCACTATGTCTGTATCCAGCTGACAC ACAAACAACTACCTTTCCCTGCAGAGGGCCCTGAATAAGCTTGGGATATTTCTGTGTTGA ACTATTTCCATGTCCCAGTTTCCCATAATCGCCATCTCCCCAACTGAAGACTTCTCCTTC TGTTGTGAAAGCTAAAGTATGACCATCAGATCCTTTAGAAGATGAGACCTTTTTAATGGA TCTATGAGGCTCAAACGTTAACTTTTTTAAAGTAGACTGATTATTAGAATCTCCAAGGCC CAGTCTCCCATAGCTGCCTTTACCACAAGCTCTGACAGAGCCATCTGTAGAAATGACAAA AGTGCAGTACTGTCCAGCTTCAATAGTCTGAGCATCAGAGAAACTAGGGGCCAGTTTGGG TTGCAGTATTTTTTCCTGTGTGCCTTCTACCAACTGATGGCTGCTGTTGCTACCCCAAAC ATAAACCTCACAGGTTTCTGAGACAATGGGAGCATCACCAGTCTGAATGCTATCTGGGCT AGCACATGTTCTTGAGTAATCAGAAGCCATTC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 189-308, - strand, RNAz p=0.558752 | |
| 454-572, - strand, RNAz p=0.898237 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 189-308, - strand, RNAz p=0.558752 | |
| 454-572, - strand, RNAz p=0.898237 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 70-384, gnl|bosTau2|chr10 (31710045-31710359) | |
| 70-384, gnl|canFam2|chr30 (31321314-31321658) | |
| 70-384, gnl|danRer3|chr19 (32235030-32234687) | |
| 70-384, gnl|dasNov1|scaffold_9553 (59259-59608) | |
| 70-384, gnl|echTel1|scaffold_181769 (6260-5911) | |
| 70-384, gnl|fr1|chrUn (23754885-23754555) | |
| 70-384, gnl|galGal2|chr10 (4744695-4744340) | |
| 70-384, gnl|hg17|chr15 (61835683-61836026) | |
| 70-384, gnl|Hg17|chr15 (61835686-61836000) | |
| 70-384, gnl|loxAfr1|scaffold_5199 (7692-7341) | |
| 70-384, gnl|mm7|chr9 (66417098-66416750) | |
| 70-384, gnl|Mm7|chr9 (66417093-66416779) | |
| 70-384, gnl|monDom2|scaffold_12 (49822852-49822505) | |
| 70-384, gnl|oryCun1|scaffold_172543 (26289-25938) | |
| 70-384, gnl|panTro1|chr16 (62295661-62296004) | |
| 70-384, gnl|rheMac2|chr7 (42125611-42125954) | |
| 70-384, gnl|rn3|chr8 (70699810-70699461) | |
| 70-384, gnl|tetNig1|chrUn_random (6641654-6641333) | |
| 70-384, gnl|xenTro1|scaffold_62 (1357959-1358302) | |
| 385-572, gnl|bosTau2|chr10 (31711332-31711519) | |
| 385-572, gnl|Hg17|chr15 (61837427-61837614) | |
| 385-572, gnl|Mm7|chr9 (66415367-66415180) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 70-384, gnl|bosTau2|chr10 (31710045-31710359) | |
| 70-384, gnl|canFam2|chr30 (31321314-31321658) | |
| 70-384, gnl|danRer3|chr19 (32235030-32234687) | |
| 70-384, gnl|dasNov1|scaffold_9553 (59259-59608) | |
| 70-384, gnl|echTel1|scaffold_181769 (6260-5911) | |
| 70-384, gnl|fr1|chrUn (23754885-23754555) | |
| 70-384, gnl|galGal2|chr10 (4744695-4744340) | |
| 70-384, gnl|hg17|chr15 (61835683-61836026) | |
| 70-384, gnl|Hg17|chr15 (61835686-61836000) | |
| 70-384, gnl|loxAfr1|scaffold_5199 (7692-7341) | |
| 70-384, gnl|mm7|chr9 (66417098-66416750) | |
| 70-384, gnl|Mm7|chr9 (66417093-66416779) | |
| 70-384, gnl|monDom2|scaffold_12 (49822852-49822505) | |
| 70-384, gnl|oryCun1|scaffold_172543 (26289-25938) | |
| 70-384, gnl|panTro1|chr16 (62295661-62296004) | |
| 70-384, gnl|rheMac2|chr7 (42125611-42125954) | |
| 70-384, gnl|rn3|chr8 (70699810-70699461) | |
| 70-384, gnl|tetNig1|chrUn_random (6641654-6641333) | |
| 70-384, gnl|xenTro1|scaffold_62 (1357959-1358302) | |
| 385-572, gnl|bosTau2|chr10 (31711332-31711519) | |
| 385-572, gnl|Hg17|chr15 (61837427-61837614) | |
| 385-572, gnl|Mm7|chr9 (66415367-66415180) |