Non-Coding RNA Search

Mixc-0031,b09

Sequence:


               
               TTTTTTTTTTCCCACAGAGGAATGTTATGTTTTGTTTTGTAATGAAGGATCGACCCAATG
CTGAAAGTTAGGTGTTACTGGGTATTCCACCACTCGTGTGGAAATTGAGTTGAAGGTGGG
TAGGAAGCTGTGAGTATGACTGAAGGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTCCCACAGAGGAATGTTATGTTTTGTTTTGTAATGAAGGATCGACCCAATG
CTGAAAGTTAGGTGTTACTGGGTATTCCACCACTCGTGTGGAAATTGAGTTGAAGGTGGG
TAGGAAGCTGTGAGTATGACTGAAGGAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               23-118, + strand, RNAz p=0.617847

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               23-118, + strand, RNAz p=0.617847

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               23-154, gnl|bosTau2|chr19 (14089240-14089108)
               

               
               23-154, gnl|canFam2|chr9 (46977928-46978199)
               

               
               23-154, gnl|echTel1|scaffold_311806 (7614-7346)
               

               
               23-154, gnl|galGal2|chr19 (5655547-5655790)
               

               
               23-154, gnl|hg17|chr17 (24895718-24895992)
               

               
               23-154, gnl|Hg17|chr17 (24895717-24895847)
               

               
               23-154, gnl|loxAfr1|scaffold_44410 (7989-8230)
               

               
               23-154, gnl|mm7|chr11 (77618061-77617827)
               

               
               23-154, gnl|monDom2|scaffold_44 (15643768-15644055)
               

               
               23-154, gnl|oryCun1|scaffold_76399 (673-941)
               

               
               23-154, gnl|panTro1|chr19 (28247221-28247495)
               

               
               23-154, gnl|rheMac2|chr16 (24775941-24776216)
               

               
               23-154, gnl|rn3|chr10 (66599439-66599668)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-154, gnl|bosTau2|chr19 (14089240-14089108)
               

               
               23-154, gnl|canFam2|chr9 (46977928-46978199)
               

               
               23-154, gnl|echTel1|scaffold_311806 (7614-7346)
               

               
               23-154, gnl|galGal2|chr19 (5655547-5655790)
               

               
               23-154, gnl|hg17|chr17 (24895718-24895992)
               

               
               23-154, gnl|Hg17|chr17 (24895717-24895847)
               

               
               23-154, gnl|loxAfr1|scaffold_44410 (7989-8230)
               

               
               23-154, gnl|mm7|chr11 (77618061-77617827)
               

               
               23-154, gnl|monDom2|scaffold_44 (15643768-15644055)
               

               
               23-154, gnl|oryCun1|scaffold_76399 (673-941)
               

               
               23-154, gnl|panTro1|chr19 (28247221-28247495)
               

               
               23-154, gnl|rheMac2|chr16 (24775941-24776216)
               

               
               23-154, gnl|rn3|chr10 (66599439-66599668)

	23-154, gnl\|bosTau2\|chr19 (14089240-14089108)
	23-154, gnl\|canFam2\|chr9 (46977928-46978199)
	23-154, gnl\|echTel1\|scaffold_311806 (7614-7346)
	23-154, gnl\|galGal2\|chr19 (5655547-5655790)
	23-154, gnl\|hg17\|chr17 (24895718-24895992)
	23-154, gnl\|Hg17\|chr17 (24895717-24895847)
	23-154, gnl\|loxAfr1\|scaffold_44410 (7989-8230)
	23-154, gnl\|mm7\|chr11 (77618061-77617827)
	23-154, gnl\|monDom2\|scaffold_44 (15643768-15644055)
	23-154, gnl\|oryCun1\|scaffold_76399 (673-941)
	23-154, gnl\|panTro1\|chr19 (28247221-28247495)
	23-154, gnl\|rheMac2\|chr16 (24775941-24776216)
	23-154, gnl\|rn3\|chr10 (66599439-66599668)