Mixc-0031j05
|
CGGGATCGTCTTGCATTTCTGCAGCCTGCACTCTCCCCTGACAAACAACTTGCACACATG
AAACTTGTTTGCATTTATCCTTGAAGGTTGCAGTAACCATACAGGGCTTCGCCTTTGTTG
TAGAGCAAACAGACCTCTGGTAAAAGGCAGGGGTCATTCTGTAAAAGCAAGATCCGAAGC
TGGGCCTCATTGAGGCCAAACAGTCCATGGTTTTTCAGGACTTGGATGTTGACAGGTGTG
TGGATATCATGAGAAAGGGTGCAGGTAGACCAGCAGACGCGGTTAGGGCACTTGCCCAGC
ATGTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGGGATCGTCTTGCATTTCTGCAGCCTGCACTCTCCCCTGACAAACAACTTGCACACATG
AAACTTGTTTGCATTTATCCTTGAAGGTTGCAGTAACCATACAGGGCTTCGCCTTTGTTG
TAGAGCAAACAGACCTCTGGTAAAAGGCAGGGGTCATTCTGTAAAAGCAAGATCCGAAGC
TGGGCCTCATTGAGGCCAAACAGTCCATGGTTTTTCAGGACTTGGATGTTGACAGGTGTG
TGGATATCATGAGAAAGGGTGCAGGTAGACCAGCAGACGCGGTTAGGGCACTTGCCCAGC
ATGTGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
133-271, gnl|bosTau2|chr4 (59941825-59941687) |
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133-271, gnl|canFam2|chr16 (12633147-12633000) |
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133-271, gnl|dasNov1|scaffold_17079 (43405-43258) |
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133-271, gnl|echTel1|scaffold_308759 (136401-136286) |
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133-271, gnl|galGal2|chrUn (157039024-157038899) |
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133-271, gnl|hg17|chr7 (138176517-138176664) |
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133-271, gnl|Hg17|chr7 (138176542-138176680) |
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133-271, gnl|loxAfr1|scaffold_4388 (25407-25544) |
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133-271, gnl|mm7|chr6 (38228851-38228998) |
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133-271, gnl|Mm7|chr6 (38228876-38229014) |
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133-271, gnl|monDom2|scaffold_22 (3467098-3466970) |
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133-271, gnl|oryCun1|scaffold_175711 (26321-26447) |
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133-271, gnl|panTro1|chr6 (140937697-140937844) |
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133-271, gnl|rheMac2|chr3 (176517788-176517935) |
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133-271, gnl|rn3|chr4 (66105723-66105870) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
133-271, gnl|bosTau2|chr4 (59941825-59941687) |
|
133-271, gnl|canFam2|chr16 (12633147-12633000) |
|
133-271, gnl|dasNov1|scaffold_17079 (43405-43258) |
|
133-271, gnl|echTel1|scaffold_308759 (136401-136286) |
|
133-271, gnl|galGal2|chrUn (157039024-157038899) |
|
133-271, gnl|hg17|chr7 (138176517-138176664) |
|
133-271, gnl|Hg17|chr7 (138176542-138176680) |
|
133-271, gnl|loxAfr1|scaffold_4388 (25407-25544) |
|
133-271, gnl|mm7|chr6 (38228851-38228998) |
|
133-271, gnl|Mm7|chr6 (38228876-38229014) |
|
133-271, gnl|monDom2|scaffold_22 (3467098-3466970) |
|
133-271, gnl|oryCun1|scaffold_175711 (26321-26447) |
|
133-271, gnl|panTro1|chr6 (140937697-140937844) |
|
133-271, gnl|rheMac2|chr3 (176517788-176517935) |
|
133-271, gnl|rn3|chr4 (66105723-66105870) |
