Non-Coding RNA Search

Mixc-0032m16

Sequence:


               
               GGGTAAAATTCGTTTGTGATATCAAAATGCAGTATTCGCACCACTGTGAGCACCTTTTAG
AGAGACTGAACAAACAACGGGAAGCTGGTTTTCTTTGTGACTGCACCATAGTGATTGGGG
AATTCCAGTTTAAAGCTCATAGGAATGTGCTTGCCTCCTTTAGTGAGTATTTTGGTGCGA
TCTACAGAAGCACTTCTGAGAACAATGTCTTTCTTGATCAGAGTCAGGTGAAGGCTGATG
GATTTCAGAAACTGTTGGAGTTTATATACACAGGAACTTTAAATCTTGACAGTTGGAATG
TTAAAGAAATCCATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGTGGTCACTAAATGTA
AAATAAAGATGGAAGATTTTGCTTTTATTGCTAATCCCTCTTCTACAGAGATATCTAGTA
TTACTGGAAATATTGAATTGAATCAACAGACTTGTCTCCTTACTCTACGAGATTATAACA
GTCGGGAGAAATCAGAAGTGTCTACAGATTTAGTTCAGGCAAATCCTAAACAAGGGGCTT
TAGCAAAGAAGTCATCTCAAACTAAAAAGAAGAAGAAGGCCTTCAACTCCCAGAAAACAC
GTCAGAATAAAACAGTGCAATATCCCAGTGACATTTTAGAAAATACGTCTGTTGAACTAT
TTCTAGATGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTAAAATTCGTTTGTGATATCAAAATGCAGTATTCGCACCACTGTGAGCACCTTTTAG
AGAGACTGAACAAACAACGGGAAGCTGGTTTTCTTTGTGACTGCACCATAGTGATTGGGG
AATTCCAGTTTAAAGCTCATAGGAATGTGCTTGCCTCCTTTAGTGAGTATTTTGGTGCGA
TCTACAGAAGCACTTCTGAGAACAATGTCTTTCTTGATCAGAGTCAGGTGAAGGCTGATG
GATTTCAGAAACTGTTGGAGTTTATATACACAGGAACTTTAAATCTTGACAGTTGGAATG
TTAAAGAAATCCATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGTGGTCACTAAATGTA
AAATAAAGATGGAAGATTTTGCTTTTATTGCTAATCCCTCTTCTACAGAGATATCTAGTA
TTACTGGAAATATTGAATTGAATCAACAGACTTGTCTCCTTACTCTACGAGATTATAACA
GTCGGGAGAAATCAGAAGTGTCTACAGATTTAGTTCAGGCAAATCCTAAACAAGGGGCTT
TAGCAAAGAAGTCATCTCAAACTAAAAAGAAGAAGAAGGCCTTCAACTCCCAGAAAACAC
GTCAGAATAAAACAGTGCAATATCCCAGTGACATTTTAGAAAATACGTCTGTTGAACTAT
TTCTAGATGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|31415668|gb|AAP44763.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|31415668|gb|AAP44763.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               323-522, + strand, RNAz p=0.989231

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               323-522, + strand, RNAz p=0.989231

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of AF155508, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of AF155508, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               284-670, gnl|bosTau2|chr1 (63245292-63244906)
               

               
               284-670, gnl|Hg17|chr3 (170979249-170979635)
               

               
               284-670, gnl|Mm7|chr3 (30418994-30419380)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               284-670, gnl|bosTau2|chr1 (63245292-63244906)
               

               
               284-670, gnl|Hg17|chr3 (170979249-170979635)
               

               
               284-670, gnl|Mm7|chr3 (30418994-30419380)

	284-670, gnl\|bosTau2\|chr1 (63245292-63244906)
	284-670, gnl\|Hg17\|chr3 (170979249-170979635)
	284-670, gnl\|Mm7\|chr3 (30418994-30419380)