Mixc-0034j09
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CCACTCGCGGCGGTCCCAGCCCACCCGGTAATCTCTTTCGAAGCGGCTGTGGTGCCTGGA
CATCTCGGTGGGCCGCGGCTGCTCCTCACGGGGAAACAGAGGCCGGACCTTTTGCCGTCC
GTCTCTGGCAAGCTCGGGATTCGTCCCCAGGATGCAAAGTCCCCGATGGCCACCAACACT
TAGTGCCACGTGCGCATCACCAGGAGGCCAGGCCGTCTCTGGCCGCGCGGCTCCGGCCCC
GGCCCGACGCGCAGAGAGCCTGGGGTAGAGAGTGGGCGCAGGAGGGTTGATGGATAGCGG
ACGGCGCCGGCGGGTAGCGGTAGCTGGGGCCGCTCGGGTCCTGGCCGGGAGAAACGGATC
CAGGTCCACCTCCTCGCGTTCCTGCTCTCCGCCTTCTCCCCCCTTTCCTTCTCCTCCTCC
TCCTCCGCCGCCGCCTCCCGGCAGCCCAGGGAGGATGCCCGGAGAGGGAAGTCAGTCCTT
CTGCCTGTCAGCCTGTGCGGCTATGCGCGGCGCAGCGCGGATCTCACCGAGGCGGCGGCG
GCGGCGGCGGCTCCGGCAGCATCGCCCCCCCGCTCTCCCCGCAGCCGCG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CCACTCGCGGCGGTCCCAGCCCACCCGGTAATCTCTTTCGAAGCGGCTGTGGTGCCTGGA
CATCTCGGTGGGCCGCGGCTGCTCCTCACGGGGAAACAGAGGCCGGACCTTTTGCCGTCC
GTCTCTGGCAAGCTCGGGATTCGTCCCCAGGATGCAAAGTCCCCGATGGCCACCAACACT
TAGTGCCACGTGCGCATCACCAGGAGGCCAGGCCGTCTCTGGCCGCGCGGCTCCGGCCCC
GGCCCGACGCGCAGAGAGCCTGGGGTAGAGAGTGGGCGCAGGAGGGTTGATGGATAGCGG
ACGGCGCCGGCGGGTAGCGGTAGCTGGGGCCGCTCGGGTCCTGGCCGGGAGAAACGGATC
CAGGTCCACCTCCTCGCGTTCCTGCTCTCCGCCTTCTCCCCCCTTTCCTTCTCCTCCTCC
TCCTCCGCCGCCGCCTCCCGGCAGCCCAGGGAGGATGCCCGGAGAGGGAAGTCAGTCCTT
CTGCCTGTCAGCCTGTGCGGCTATGCGCGGCGCAGCGCGGATCTCACCGAGGCGGCGGCG
GCGGCGGCGGCTCCGGCAGCATCGCCCCCCCGCTCTCCCCGCAGCCGCG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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377-492, - strand, RNAmicro p=0.938226 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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377-492, - strand, RNAmicro p=0.938226 |
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1-110, gnl|bosTau2|chr11 (55894977-55894868) |
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1-110, gnl|canFam2|chr17 (21091553-21091687) |
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1-110, gnl|danRer3|chr23 (11251402-11251308) |
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1-110, gnl|dasNov1|scaffold_71288 (8666-8795) |
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1-110, gnl|fr1|chrUn (220033141-220033247) |
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1-110, gnl|galGal2|chr3 (101926672-101926801) |
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1-110, gnl|hg17|chr2 (23696654-23696788) |
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1-110, gnl|Hg17|chr2 (23696781-23696672) |
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1-110, gnl|loxAfr1|scaffold_20162 (10892-11028) |
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1-110, gnl|mm7|chr12 (5152079-5151947) |
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1-110, gnl|Mm7|chr12 (5151952-5152061) |
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1-110, gnl|monDom2|scaffold_477 (21487-21607) |
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1-110, gnl|oryCun1|scaffold_208070 (20314-20180) |
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1-110, gnl|panTro1|chr12 (24581773-24581907) |
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1-110, gnl|rheMac2|chr13 (23469663-23469797) |
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1-110, gnl|rn3|chr6 (28528974-28528842) |
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1-110, gnl|xenTro1|scaffold_226 (1080024-1079873) |
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217-589, gnl|bosTau2|chr11 (55685226-55684856) |
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217-589, gnl|Hg17|chr2 (23520303-23519934) |
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217-589, gnl|Mm7|chr12 (5317885-5318255) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-110, gnl|bosTau2|chr11 (55894977-55894868) |
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1-110, gnl|canFam2|chr17 (21091553-21091687) |
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1-110, gnl|danRer3|chr23 (11251402-11251308) |
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1-110, gnl|dasNov1|scaffold_71288 (8666-8795) |
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1-110, gnl|fr1|chrUn (220033141-220033247) |
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1-110, gnl|galGal2|chr3 (101926672-101926801) |
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1-110, gnl|hg17|chr2 (23696654-23696788) |
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1-110, gnl|Hg17|chr2 (23696781-23696672) |
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1-110, gnl|loxAfr1|scaffold_20162 (10892-11028) |
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1-110, gnl|mm7|chr12 (5152079-5151947) |
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1-110, gnl|Mm7|chr12 (5151952-5152061) |
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1-110, gnl|monDom2|scaffold_477 (21487-21607) |
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1-110, gnl|oryCun1|scaffold_208070 (20314-20180) |
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1-110, gnl|panTro1|chr12 (24581773-24581907) |
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1-110, gnl|rheMac2|chr13 (23469663-23469797) |
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1-110, gnl|rn3|chr6 (28528974-28528842) |
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1-110, gnl|xenTro1|scaffold_226 (1080024-1079873) |
| |
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217-589, gnl|bosTau2|chr11 (55685226-55684856) |
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217-589, gnl|Hg17|chr2 (23520303-23519934) |
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217-589, gnl|Mm7|chr12 (5317885-5318255) |
