Non-Coding RNA Search

Mixc-0034o09

Sequence:


               
               TTTAAGGCCACGTGAGAAGACTTGGAAAAGGACCCCAGGGAAGGTCCGGCTTGGGTGCTC
TGCCACCCCAATGCAAAAGCACACGATAAACTCAGGTCACCTCGAGAGGGAGAGGCTGGG
GCAGGGCTCCCCACCCCCACCGCCTGTAACTAGAGGATGGGAGCGGAGGAAGGGCGGTTT
GTCCGGAGGACAGGTGCCTGGCGGCCAGGCCGGCCTGGGAGGCGGGGGACGACGGCCAAG
GTCGTTCCTGACAGCGTCCAGTTGGTCCTGAAGGAGGCGGACCCGCTCGTCCAGGCTGCG
CTGCTGGGCTAGGACGGCGGCCTTGCCGGCCAGCAGGGCGCGGTAGGTGCGCAGCTCCTC
GGCCGGCAGCGCGCGCACCAGCACCTCGCGCAGGGNCCGCTCGCGCCGCGCCACGTGCTG
CTTCAGCTCCTTGGCGTCTTCCTGCTGCCTCTGCAGGAGCCCCAGTCGCTGCAGCAGAGA
GGCCTGCTCCTCAAGGTCGCCGTCTGCGCCCGCCCGGGCCAGGGCACGGCGCACGCGGGC
CAGGCGACTGCCCAGCAGCAGCAGGAGCCAAGCACCCGCTCTAAGTCGGGCATGAACCGG
CTGAACCGCTCCAGCTCGTGGGGGGCACATGCCTGGGCCACCGCGGACTCCAGAACAACC
CTGCACCTGGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAAGGCCACGTGAGAAGACTTGGAAAAGGACCCCAGGGAAGGTCCGGCTTGGGTGCTC
TGCCACCCCAATGCAAAAGCACACGATAAACTCAGGTCACCTCGAGAGGGAGAGGCTGGG
GCAGGGCTCCCCACCCCCACCGCCTGTAACTAGAGGATGGGAGCGGAGGAAGGGCGGTTT
GTCCGGAGGACAGGTGCCTGGCGGCCAGGCCGGCCTGGGAGGCGGGGGACGACGGCCAAG
GTCGTTCCTGACAGCGTCCAGTTGGTCCTGAAGGAGGCGGACCCGCTCGTCCAGGCTGCG
CTGCTGGGCTAGGACGGCGGCCTTGCCGGCCAGCAGGGCGCGGTAGGTGCGCAGCTCCTC
GGCCGGCAGCGCGCGCACCAGCACCTCGCGCAGGGNCCGCTCGCGCCGCGCCACGTGCTG
CTTCAGCTCCTTGGCGTCTTCCTGCTGCCTCTGCAGGAGCCCCAGTCGCTGCAGCAGAGA
GGCCTGCTCCTCAAGGTCGCCGTCTGCGCCCGCCCGGGCCAGGGCACGGCGCACGCGGGC
CAGGCGACTGCCCAGCAGCAGCAGGAGCCAAGCACCCGCTCTAAGTCGGGCATGAACCGG
CTGAACCGCTCCAGCTCGTGGGGGGCACATGCCTGGGCCACCGCGGACTCCAGAACAACC
CTGCACCTGGCCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               79-191, - strand, RNAz p=0.953649

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               79-191, - strand, RNAz p=0.953649

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_133456, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_133456, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-550, gnl|bosTau2|chr7 (28460868-28461421)
               

               
               4-550, gnl|Hg17|chr5 (132185911-132187149)
               

               
               4-550, gnl|Mm7|chr11 (53423999-53423092)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-550, gnl|bosTau2|chr7 (28460868-28461421)
               

               
               4-550, gnl|Hg17|chr5 (132185911-132187149)
               

               
               4-550, gnl|Mm7|chr11 (53423999-53423092)

	4-550, gnl\|bosTau2\|chr7 (28460868-28461421)
	4-550, gnl\|Hg17\|chr5 (132185911-132187149)
	4-550, gnl\|Mm7\|chr11 (53423999-53423092)