Non-Coding RNA Search

Mixc-0035f24

Sequence:


               
               TACTTGTGAAAAAGTTGAGGCCCTTAGCACAAGAAAATTCAGAGCTAGAAAGGGAAAATA
GGAAATTTAAAAAAACATTGGATAGCTTTAAAAACCTTACTTTTCAGTTAGAATCCCTAG
CAAAAGAGAATTCCCAGCTTGATGAGGAAAACTTAGAGTTGCGAAGAAATGTGGAATCTT
TGAAGTGTGCAAGCATGAAAATGGCTCAGCTCCAACTAGAAAATAAAGAATTAGAAAGTG
AAAAAGAACAACTTAAGAAAGGTTTAGAGCTCATGAAAGCATCTTTCAAGAAAACAGAAC
GCCTGGAAGTTAGCTACCAGGGTTTAGATACAGAAAATCAAAGGCTACAGAAAGCTCTAG
AAAACAGCAATAAAAAAATTCAGCAACTGGAAAGTGAACTACAAGATTTAGAGATGGAAA
ATCAAACATTGCAAAAAACCTAGAAGAGTTAAAAATATCTAGCAAAAGACTTGAACAGCT
AGAAAAAGAAAACAAATCGTTAGAGCAAGAGACTTCTCAGCTGGAAAAGGATAAGAAACA
ACTGGAGAAGGAAAATAAGAGACTCCGACAGCAAGCTAGAAATAAAAGATACCACATTAG
AAGAAAATAATGTGAAAATTGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTTGTGAAAAAGTTGAGGCCCTTAGCACAAGAAAATTCAGAGCTAGAAAGGGAAAATA
GGAAATTTAAAAAAACATTGGATAGCTTTAAAAACCTTACTTTTCAGTTAGAATCCCTAG
CAAAAGAGAATTCCCAGCTTGATGAGGAAAACTTAGAGTTGCGAAGAAATGTGGAATCTT
TGAAGTGTGCAAGCATGAAAATGGCTCAGCTCCAACTAGAAAATAAAGAATTAGAAAGTG
AAAAAGAACAACTTAAGAAAGGTTTAGAGCTCATGAAAGCATCTTTCAAGAAAACAGAAC
GCCTGGAAGTTAGCTACCAGGGTTTAGATACAGAAAATCAAAGGCTACAGAAAGCTCTAG
AAAACAGCAATAAAAAAATTCAGCAACTGGAAAGTGAACTACAAGATTTAGAGATGGAAA
ATCAAACATTGCAAAAAACCTAGAAGAGTTAAAAATATCTAGCAAAAGACTTGAACAGCT
AGAAAAAGAAAACAAATCGTTAGAGCAAGAGACTTCTCAGCTGGAAAAGGATAAGAAACA
ACTGGAGAAGGAAAATAAGAGACTCCGACAGCAAGCTAGAAATAAAAGATACCACATTAG
AAGAAAATAATGTGAAAATTGGAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               40-159, - strand, RNAz p=0.803454

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-159, - strand, RNAz p=0.803454

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-624, gnl|bosTau2|chr11 (20403896-20403274)
               

               
               1-624, gnl|Hg17|chr2 (55473649-55473027)
               

               
               1-624, gnl|Mm7|chr11 (29415428-29416050)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-624, gnl|bosTau2|chr11 (20403896-20403274)
               

               
               1-624, gnl|Hg17|chr2 (55473649-55473027)
               

               
               1-624, gnl|Mm7|chr11 (29415428-29416050)

	1-624, gnl\|bosTau2\|chr11 (20403896-20403274)
	1-624, gnl\|Hg17\|chr2 (55473649-55473027)
	1-624, gnl\|Mm7\|chr11 (29415428-29416050)