Mixc-0035i22
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAAATACCTGGGTGCTGGGGAACTGCGAGTACACGGCTGACATTGTTACGCAGCCATTG GTGAAGGGATCACACCTCCCCGGAATTTACCCGTAACCTGTTCATTGGTTGTGCGCCCCC TAGCCACCAGCACCACGTGAAATCCCGTGAGGCCAGCTACCGGGATAAAGAACAAGCCAG CCACACACATCACTGCCATTGTGACAGCCGTGCAGACCCCTGAGAGTTCCTCCATGTGGT AAAGGACATAAAGGAGGCCAAAGCCGAACACACCCATAATGTGGGCCGTCAGGGAAAGGA GGAAGAGGAAGAAATAACGGTAGTTCCGGCGACCGATACAGTTGTTCACCCAGAGGGCAG TGATGATCAAATTCCTCCACACAGTTGTCACAGACACTGCAGTGGGAACATCGAGGAGGA CGGTATAAGCGGCAGGTGGCACACCATTTCATGCGCACCTGGATGCCCTTGATCTCCACT GTTTTGTAAAGGGGAGCTCGGAAGTCATCTTCCTTGTCTTCATCCTCCTCAGCTCGAGGG AAGATCCCTGGGTCCATGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAAATACCTGGGTGCTGGGGAACTGCGAGTACACGGCTGACATTGTTACGCAGCCATTG GTGAAGGGATCACACCTCCCCGGAATTTACCCGTAACCTGTTCATTGGTTGTGCGCCCCC TAGCCACCAGCACCACGTGAAATCCCGTGAGGCCAGCTACCGGGATAAAGAACAAGCCAG CCACACACATCACTGCCATTGTGACAGCCGTGCAGACCCCTGAGAGTTCCTCCATGTGGT AAAGGACATAAAGGAGGCCAAAGCCGAACACACCCATAATGTGGGCCGTCAGGGAAAGGA GGAAGAGGAAGAAATAACGGTAGTTCCGGCGACCGATACAGTTGTTCACCCAGAGGGCAG TGATGATCAAATTCCTCCACACAGTTGTCACAGACACTGCAGTGGGAACATCGAGGAGGA CGGTATAAGCGGCAGGTGGCACACCATTTCATGCGCACCTGGATGCCCTTGATCTCCACT GTTTTGTAAAGGGGAGCTCGGAAGTCATCTTCCTTGTCTTCATCCTCCTCAGCTCGAGGG AAGATCCCTGGGTCCATGAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 175-332, - strand, RNAz p=0.979591 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 175-332, - strand, RNAz p=0.979591 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC026967, - |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 175-376, gnl|bosTau2|chr15 (50462695-50462895) | |
| 175-376, gnl|canFam2|chr18 (41570202-41570002) | |
| 175-376, gnl|canFam2|chr26 (32267461-32267276) | |
| 175-376, gnl|danRer3|chrNA (225159306-225159505) | |
| 175-376, gnl|danRer3|chrUn (127253826-127253637) | |
| 175-376, gnl|dasNov1|scaffold_25591 (6406-6591) | |
| 175-376, gnl|dasNov1|scaffold_25591 (6392-6591) | |
| 175-376, gnl|echTel1|scaffold_325104 (3349-3164) | |
| 175-376, gnl|echTel1|scaffold_325104 (3364-3164) | |
| 175-376, gnl|fr1|chrUn (71880628-71880818) | |
| 175-376, gnl|fr1|chrUn (235983587-235983782) | |
| 175-376, gnl|galGal2|chr15 (1366485-1366670) | |
| 175-376, gnl|galGal2|chr5 (14271180-14270984) | |
| 175-376, gnl|hg17|chr11 (57214061-57214260) | |
| 175-376, gnl|Hg17|chr11 (57214278-57214077) | |
| 175-376, gnl|hg17|chr22 (18501793-18501978) | |
| 175-376, gnl|loxAfr1|scaffold_15132 (41791-41592) | |
| 175-376, gnl|loxAfr1|scaffold_50777 (7308-7493) | |
| 175-376, gnl|mm7|chr16 (17777969-17777785) | |
| 175-376, gnl|mm7|chr2 (84538478-84538279) | |
| 175-376, gnl|Mm7|chr2 (84538260-84538460) | |
| 175-376, gnl|monDom2|scaffold_33 (20822289-20822474) | |
| 175-376, gnl|monDom2|scaffold_33 (20822273-20822474) | |
| 175-376, gnl|oryCun1|scaffold_141865 (35001-34851) | |
| 175-376, gnl|oryCun1|scaffold_185859 (2811-3011) | |
| 175-376, gnl|panTro1|chr23 (18487113-18487298) | |
| 175-376, gnl|panTro1|chr9 (58124222-58124421) | |
| 175-376, gnl|rheMac2|chr10 (64208455-64208640) | |
| 175-376, gnl|rheMac2|chr14 (15720245-15720046) | |
| 175-376, gnl|rn3|chr11 (84796284-84796468) | |
| 175-376, gnl|rn3|chr3 (67800813-67800614) | |
| 175-376, gnl|tetNig1|chr1 (6971140-6971332) | |
| 175-376, gnl|tetNig1|chr12 (10858995-10859185) | |
| 175-376, gnl|xenTro1|scaffold_118 (1544149-1544333) | |
| 175-376, gnl|xenTro1|scaffold_118 (1544134-1544333) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 175-376, gnl|bosTau2|chr15 (50462695-50462895) | |
| 175-376, gnl|canFam2|chr18 (41570202-41570002) | |
| 175-376, gnl|canFam2|chr26 (32267461-32267276) | |
| 175-376, gnl|danRer3|chrNA (225159306-225159505) | |
| 175-376, gnl|danRer3|chrUn (127253826-127253637) | |
| 175-376, gnl|dasNov1|scaffold_25591 (6406-6591) | |
| 175-376, gnl|dasNov1|scaffold_25591 (6392-6591) | |
| 175-376, gnl|echTel1|scaffold_325104 (3349-3164) | |
| 175-376, gnl|echTel1|scaffold_325104 (3364-3164) | |
| 175-376, gnl|fr1|chrUn (71880628-71880818) | |
| 175-376, gnl|fr1|chrUn (235983587-235983782) | |
| 175-376, gnl|galGal2|chr15 (1366485-1366670) | |
| 175-376, gnl|galGal2|chr5 (14271180-14270984) | |
| 175-376, gnl|hg17|chr11 (57214061-57214260) | |
| 175-376, gnl|Hg17|chr11 (57214278-57214077) | |
| 175-376, gnl|hg17|chr22 (18501793-18501978) | |
| 175-376, gnl|loxAfr1|scaffold_15132 (41791-41592) | |
| 175-376, gnl|loxAfr1|scaffold_50777 (7308-7493) | |
| 175-376, gnl|mm7|chr16 (17777969-17777785) | |
| 175-376, gnl|mm7|chr2 (84538478-84538279) | |
| 175-376, gnl|Mm7|chr2 (84538260-84538460) | |
| 175-376, gnl|monDom2|scaffold_33 (20822289-20822474) | |
| 175-376, gnl|monDom2|scaffold_33 (20822273-20822474) | |
| 175-376, gnl|oryCun1|scaffold_141865 (35001-34851) | |
| 175-376, gnl|oryCun1|scaffold_185859 (2811-3011) | |
| 175-376, gnl|panTro1|chr23 (18487113-18487298) | |
| 175-376, gnl|panTro1|chr9 (58124222-58124421) | |
| 175-376, gnl|rheMac2|chr10 (64208455-64208640) | |
| 175-376, gnl|rheMac2|chr14 (15720245-15720046) | |
| 175-376, gnl|rn3|chr11 (84796284-84796468) | |
| 175-376, gnl|rn3|chr3 (67800813-67800614) | |
| 175-376, gnl|tetNig1|chr1 (6971140-6971332) | |
| 175-376, gnl|tetNig1|chr12 (10858995-10859185) | |
| 175-376, gnl|xenTro1|scaffold_118 (1544149-1544333) | |
| 175-376, gnl|xenTro1|scaffold_118 (1544134-1544333) |