Non-Coding RNA Search

Mixc-0036c23

Sequence:


               
               ATCAGATATTCTGGATACTTCATTTGACTGAAGGGTGAGAACCACTTAGGCCTTGATATC
CTTAAGACCTAACAGATTTTCTGCCTTCAAAAGGAAACAGAAAGAATTCATGTGCACTGT
TCCACTTCTGGTTAAATGAAAGAGGCTAGTAACTTCTCTAGCTCAAGTTCTCACATCTCT
GAAATTCCTTCTGGTACCCCATAGAAGATGTACAATACATGCCAGGAACTATTCTGGGCT
CCCATGACAGGGTTCAGGCAACTTTCACAAAACAGGGTAGGCAACTCCCAAGGTCTTAAA
TATGTCAAGCCTTCTCCACACCCAGAAGAGTACAGACTGATTAAAGTTACTGTGCCATTT
TCCAATTCGGCCCAGGTTAGGTGATCCTACCTGTGAGACTGATAATATAGAAAGTCCAAA
TCTCAAAGCACATTTTAATGTTAAAATATTTAAGCCTTCTAGGAGTTCCCTTGTGGTCTA
GTGGTTAGGACCCAGCACTTTCACCTCTGTGGCCCTGGTTCAATCCCTGGTCTGGGAACT
GATATCCCACATCAAACCACTGCATACCCGAGCCAGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCAGATATTCTGGATACTTCATTTGACTGAAGGGTGAGAACCACTTAGGCCTTGATATC
CTTAAGACCTAACAGATTTTCTGCCTTCAAAAGGAAACAGAAAGAATTCATGTGCACTGT
TCCACTTCTGGTTAAATGAAAGAGGCTAGTAACTTCTCTAGCTCAAGTTCTCACATCTCT
GAAATTCCTTCTGGTACCCCATAGAAGATGTACAATACATGCCAGGAACTATTCTGGGCT
CCCATGACAGGGTTCAGGCAACTTTCACAAAACAGGGTAGGCAACTCCCAAGGTCTTAAA
TATGTCAAGCCTTCTCCACACCCAGAAGAGTACAGACTGATTAAAGTTACTGTGCCATTT
TCCAATTCGGCCCAGGTTAGGTGATCCTACCTGTGAGACTGATAATATAGAAAGTCCAAA
TCTCAAAGCACATTTTAATGTTAAAATATTTAAGCCTTCTAGGAGTTCCCTTGTGGTCTA
GTGGTTAGGACCCAGCACTTTCACCTCTGTGGCCCTGGTTCAATCCCTGGTCTGGGAACT
GATATCCCACATCAAACCACTGCATACCCGAGCCAGAAAAAAAAAA

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               467-538, tRNA Pseudo : RF00005;tRNA; (AJ410870.2/121779-121850), RaveNnA 
Score=32.09

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               467-538, tRNA Pseudo : RF00005;tRNA; (AJ410870.2/121779-121850), RaveNnA 
Score=32.09