Non-Coding RNA Search

Mixc-0036i15

Sequence:


               
               TGGGGGCGCGAGTCCTGCCCTCCTGGGAGATGACGGGCTGCTGGCCAAGCACCAAGAACA
CCAGCTCCTCCTTCTCCCGGCACATGTCGGTAGAGATGTCGTGGAGGCTGAGATAGTCCC
TCAGGTCCTTCACTTTCATCTTCATGAGCTCCTCCCGCTGGAAGGCTGTGGCTCGGAAGC
GCTGGCAGAGAAGGCAGAGGCGGGGCCCGGTGCCCACTTGGCTCGAACAGGTCGTGCAGA
AGTTCTTCTTACAGTCCAAGCAGGTCTGCTTCCTGGACATGCTGGCGAAGTGGGCCCCAC
AGGCCTTGCAGCTTGGTTCCGAGCCCGTCGGGGAGGGGAAGGAGCTGTACCCAGGGTTGG
AATAGGCCTGCGTCCTGGCTCCCTGGGGCGGTGGGGCCTCCTCAGGCTGTCCATCCAGGC
AGAACCAGTTGCAGCAGGTTGCCCACATGATAAAATCTGCCGAGGCCGCCTGTCCGGCCC
GCACCTGGGAGGGGAGGGGAGGGGCCGGATCCGGGCCGCAGACGCCTCAGGCAGGGGGGC
TGCGGGCTCCGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGGGCGCGAGTCCTGCCCTCCTGGGAGATGACGGGCTGCTGGCCAAGCACCAAGAACA
CCAGCTCCTCCTTCTCCCGGCACATGTCGGTAGAGATGTCGTGGAGGCTGAGATAGTCCC
TCAGGTCCTTCACTTTCATCTTCATGAGCTCCTCCCGCTGGAAGGCTGTGGCTCGGAAGC
GCTGGCAGAGAAGGCAGAGGCGGGGCCCGGTGCCCACTTGGCTCGAACAGGTCGTGCAGA
AGTTCTTCTTACAGTCCAAGCAGGTCTGCTTCCTGGACATGCTGGCGAAGTGGGCCCCAC
AGGCCTTGCAGCTTGGTTCCGAGCCCGTCGGGGAGGGGAAGGAGCTGTACCCAGGGTTGG
AATAGGCCTGCGTCCTGGCTCCCTGGGGCGGTGGGGCCTCCTCAGGCTGTCCATCCAGGC
AGAACCAGTTGCAGCAGGTTGCCCACATGATAAAATCTGCCGAGGCCGCCTGTCCGGCCC
GCACCTGGGAGGGGAGGGGAGGGGCCGGATCCGGGCCGCAGACGCCTCAGGCAGGGGGGC
TGCGGGCTCCGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61679499|pdb|1Y02|A

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61679499|pdb|1Y02|A

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-159, - strand, RNAz p=0.650147

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-159, - strand, RNAz p=0.650147

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-270, gnl|bosTau2|chr19 (8915662-8915931)
               

               
               3-270, gnl|Hg17|chr17 (30372646-30372915)
               

               
               3-270, gnl|Mm7|chr11 (82894118-82894387)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-270, gnl|bosTau2|chr19 (8915662-8915931)
               

               
               3-270, gnl|Hg17|chr17 (30372646-30372915)
               

               
               3-270, gnl|Mm7|chr11 (82894118-82894387)

	3-270, gnl\|bosTau2\|chr19 (8915662-8915931)
	3-270, gnl\|Hg17\|chr17 (30372646-30372915)
	3-270, gnl\|Mm7\|chr11 (82894118-82894387)