Non-Coding RNA Search

Mixc-0036k17

Sequence:


               
               GCCCGGCGGAGAATCCGTCTCAACACGTACCTGTGTGAGGCAGAACCCAGTCNCCTGCTA
GACAACATGCCCAGCCTAGCATTTGCAGTAGGTTCTTTGGATTCTGCCCAAAGCAACATG
ACCAACTTTTTCTTTCTCTTTCAGAGACTTTCTTTTATCTTAAAACTGCTTGTTTCTGCA
TTCCCCCGCGGTCATTAATTCCAGCACGCAACTCAGTAATACATCCACAAATGTGCATCA
AGGATAACTAGGGAGTAACCCTGGTATATTTTCCAACCTTGTTCTGCTGAACCAGAGATG
GAGGCAAGAAGTACAGACCAGAAGGCTGACTTGATGCCCACAATCCCAGGTCCTGCCTGC
AATGAAGTTCCCTGGGGTTAATCAGTATCCACCACACCCGTGCCAGTGCCAATATCTTAC
CACACAACTTTACATACAATCCTTATCATCTTGTACTTATTAGCAGCAAAGACTTCATAT
GACGAATGCTAAAATAAGCTGAGAGAGTTTCTTGATGGCTCAACAGATTAATGATCTCGG
AGCTGTCACTGCTGTGACTCGGATTCAATCCTGGTGCAGGTTCGATCCCTGACCCAGGAA
TTTCCAAATGCCACAGGTGCAGCCAAAATCAATCAATCAATCAATCAAATGAGTTGAACT
TCCTTTATACCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCGGCGGAGAATCCGTCTCAACACGTACCTGTGTGAGGCAGAACCCAGTCNCCTGCTA
GACAACATGCCCAGCCTAGCATTTGCAGTAGGTTCTTTGGATTCTGCCCAAAGCAACATG
ACCAACTTTTTCTTTCTCTTTCAGAGACTTTCTTTTATCTTAAAACTGCTTGTTTCTGCA
TTCCCCCGCGGTCATTAATTCCAGCACGCAACTCAGTAATACATCCACAAATGTGCATCA
AGGATAACTAGGGAGTAACCCTGGTATATTTTCCAACCTTGTTCTGCTGAACCAGAGATG
GAGGCAAGAAGTACAGACCAGAAGGCTGACTTGATGCCCACAATCCCAGGTCCTGCCTGC
AATGAAGTTCCCTGGGGTTAATCAGTATCCACCACACCCGTGCCAGTGCCAATATCTTAC
CACACAACTTTACATACAATCCTTATCATCTTGTACTTATTAGCAGCAAAGACTTCATAT
GACGAATGCTAAAATAAGCTGAGAGAGTTTCTTGATGGCTCAACAGATTAATGATCTCGG
AGCTGTCACTGCTGTGACTCGGATTCAATCCTGGTGCAGGTTCGATCCCTGACCCAGGAA
TTTCCAAATGCCACAGGTGCAGCCAAAATCAATCAATCAATCAATCAAATGAGTTGAACT
TCCTTTATACCAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               231-348, + strand, RNAz p=0.595667

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               231-348, + strand, RNAz p=0.595667

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-502, gnl|bosTau2|chr18 (648622-648135)
               

               
               1-502, gnl|Hg17|chr16 (68859754-68860233)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-502, gnl|bosTau2|chr18 (648622-648135)
               

               
               1-502, gnl|Hg17|chr16 (68859754-68860233)

	1-502, gnl\|bosTau2\|chr18 (648622-648135)
	1-502, gnl\|Hg17\|chr16 (68859754-68860233)