Non-Coding RNA Search

Mixc-0038,f08

Sequence:


               
               TCTTGTAACACATGGACTCTTGGCATTGGTGGATTTAATGTTGTGATGTCAGCTAGCAGA
CAGTTGCCCCTGAAATCTGCCTAATGTAGTTAAGTTTATACTTTTGCTGGGCATCTGTGT
TCCAGACTGATGCCTGTGTGAATCCCCCAGCTGGTGAGTGAGTAGCAAACCATCCAATGC
AGCTTTCTCATCCCTGGCTCTTTGTTGTTGATGTAGTAAATCTTATGAAATGACGGGGAT
TCTGTGTTTGTGGAGGAAAATGGAGTAAAGAGGTCTAAAGGTAACAGTTCTGTCTAGAAA
GAAAACACATATTATGGGAGTGATGCAAGAGAATTTGAAGATTTGAGAATTTGGCTAGAT
CTGGGGATGTGTCCACTAAGAGTTTACCAATACCTAACATTTGTTTACTGTTTCACAGTT
TATATGGTGCTTTTATAGAACTGATTTCTCTCTTCTTTTGAGTATTCTTTTCCTGATTTC
TTTCTTGTCTTGTCCTTCATTCTTTCTTTTTATAATATTGATCCTGCTTTGCCTGCCTTA
ATTTCTGTATTTCTCATTTTACTCAGCTAGCAAGTGGCAGGCCATACTCAGGGCTTCTGA
ATCCAAAAGCCGGGACTCTGTGTTATGTCAATTTAGCTTCCAGTATCTATTCCAGTTATA
AACAACTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTGTAACACATGGACTCTTGGCATTGGTGGATTTAATGTTGTGATGTCAGCTAGCAGA
CAGTTGCCCCTGAAATCTGCCTAATGTAGTTAAGTTTATACTTTTGCTGGGCATCTGTGT
TCCAGACTGATGCCTGTGTGAATCCCCCAGCTGGTGAGTGAGTAGCAAACCATCCAATGC
AGCTTTCTCATCCCTGGCTCTTTGTTGTTGATGTAGTAAATCTTATGAAATGACGGGGAT
TCTGTGTTTGTGGAGGAAAATGGAGTAAAGAGGTCTAAAGGTAACAGTTCTGTCTAGAAA
GAAAACACATATTATGGGAGTGATGCAAGAGAATTTGAAGATTTGAGAATTTGGCTAGAT
CTGGGGATGTGTCCACTAAGAGTTTACCAATACCTAACATTTGTTTACTGTTTCACAGTT
TATATGGTGCTTTTATAGAACTGATTTCTCTCTTCTTTTGAGTATTCTTTTCCTGATTTC
TTTCTTGTCTTGTCCTTCATTCTTTCTTTTTATAATATTGATCCTGCTTTGCCTGCCTTA
ATTTCTGTATTTCTCATTTTACTCAGCTAGCAAGTGGCAGGCCATACTCAGGGCTTCTGA
ATCCAAAAGCCGGGACTCTGTGTTATGTCAATTTAGCTTCCAGTATCTATTCCAGTTATA
AACAACTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               40-156, - strand, RNAz p=0.998894

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-156, - strand, RNAz p=0.998894

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-669, gnl|bosTau2|chr28 (5058722-5059437)
               

               
               1-669, gnl|Hg17|chr1 (233354671-233355413)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-669, gnl|bosTau2|chr28 (5058722-5059437)
               

               
               1-669, gnl|Hg17|chr1 (233354671-233355413)

	1-669, gnl\|bosTau2\|chr28 (5058722-5059437)
	1-669, gnl\|Hg17\|chr1 (233354671-233355413)