Mixc-0038,m15
|
GCTGGGCGGCGGGTGCCGGTGCGCACAGAGCCAGTGCTCCCGCGGTGCCGCGCGGGTCGG
GTCCCACGACTTAAGGAGAGGTCTGCGCGCTGCCTCGGCCAGCGAGCCCCCAGGCGCCCG
CGCCCCGACCCGGGGCTGAGTTAGGGGCATGCTCCGGCCCCCCCGGAACCGGAGAGAGAA
CCCAGGAGCGCCGCCGCCCAGCTCCAGCGCCCCGAACCGAACCGCTGCGAAGGGGCCCTG
AACAGCCGCTCCCCGCCCCACCCGCAGTTCAGGGGGGGGAAGGGGGGGTCGGCGACAAAA
GTCTGGGCTTCTGAGAAAGCCAGGGTGGGAACCCTAAGTGGACTCCTCGGACCCCCAGGG
ACCCCCAGGAAGATCCTGAAACCTGAGCCATCCTCCTCTCTACCGCGCTTGTCCCCCAGA
ACTGGGCAGTTGCCGAAGGCCCTTGGGGGGGGGGCCCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCTGGGCGGCGGGTGCCGGTGCGCACAGAGCCAGTGCTCCCGCGGTGCCGCGCGGGTCGG
GTCCCACGACTTAAGGAGAGGTCTGCGCGCTGCCTCGGCCAGCGAGCCCCCAGGCGCCCG
CGCCCCGACCCGGGGCTGAGTTAGGGGCATGCTCCGGCCCCCCCGGAACCGGAGAGAGAA
CCCAGGAGCGCCGCCGCCCAGCTCCAGCGCCCCGAACCGAACCGCTGCGAAGGGGCCCTG
AACAGCCGCTCCCCGCCCCACCCGCAGTTCAGGGGGGGGAAGGGGGGGTCGGCGACAAAA
GTCTGGGCTTCTGAGAAAGCCAGGGTGGGAACCCTAAGTGGACTCCTCGGACCCCCAGGG
ACCCCCAGGAAGATCCTGAAACCTGAGCCATCCTCCTCTCTACCGCGCTTGTCCCCCAGA
ACTGGGCAGTTGCCGAAGGCCCTTGGGGGGGGGGCCCA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-278, gnl|bosTau2|chr29 (34094109-34094390) |
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1-278, gnl|Hg17|chr11 (64448753-64449048) |
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1-278, gnl|Mm7|chr19 (6130633-6130346) |
| |
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318-450, gnl|bosTau2|chr29 (34094864-34094986) |
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318-450, gnl|canFam2|chr18 (55277042-55276779) |
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318-450, gnl|hg17|chr11 (64449393-64449646) |
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318-450, gnl|Hg17|chr11 (64449519-64449642) |
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318-450, gnl|mm7|chr19 (6130028-6129786) |
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318-450, gnl|Mm7|chr19 (6129902-6129785) |
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318-450, gnl|monDom2|scaffold_646 (412-148) |
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318-450, gnl|panTro1|chr9 (65676623-65676877) |
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318-450, gnl|rn3|chr1 (209168439-209168192) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-278, gnl|bosTau2|chr29 (34094109-34094390) |
|
1-278, gnl|Hg17|chr11 (64448753-64449048) |
|
1-278, gnl|Mm7|chr19 (6130633-6130346) |
| |
|
318-450, gnl|bosTau2|chr29 (34094864-34094986) |
|
318-450, gnl|canFam2|chr18 (55277042-55276779) |
|
318-450, gnl|hg17|chr11 (64449393-64449646) |
|
318-450, gnl|Hg17|chr11 (64449519-64449642) |
|
318-450, gnl|mm7|chr19 (6130028-6129786) |
|
318-450, gnl|Mm7|chr19 (6129902-6129785) |
|
318-450, gnl|monDom2|scaffold_646 (412-148) |
|
318-450, gnl|panTro1|chr9 (65676623-65676877) |
|
318-450, gnl|rn3|chr1 (209168439-209168192) |
