Non-Coding RNA Search

Mixc-0039,g07

Sequence:


               
               GTGAGATTTAAGTACTGTCTGCTTGCTGAAGACACCTTGCAATTTCAACGATTCCTTTGA
GGGAACAGATGTTACATCGGAGCAGAGATAAGATGCCACCAATGGTTGCAGCTTTCCCAA
GTCTTCCTTGGTAGGATTATTTCGGAAGTCTAGACTGGGATCCTCTGCAGCAATGGCTTT
TCTTTTGGTTCCGTTGGCAGCAATAAGGATGTTGGCGTTGCCGTTATTTTCGGCACTGCC
AGGGGACAAAGTGGAGGATGGGGGAGCCAGTTTGAACCGGATATGGTGTGCTTCAGCTGC
TGCATCAGTGAGAGCGGGCGCCATCGCAGCCATTCAGCACAGAGAGACAGGAAGTCCAGC
CTCTCCCGCTGCCGAGGCCAGCTCCACAGCCCCTTACTGCCTCCCCAGAGAACAGACACG
TGATGGAAGAGCGTTGCCCGGGCGGATTCAGCCCACAAAATGGGCGCAGTTTGCAAACAG
CCCCCGGCCTGGGCGCCAAGGGCCGGCGGCGGCGGCGGCAGCGGGCGGGGGCGCGCGGCG
GCGGCTCCGGCCCGGGCCCGCCGCTCTCCTCCCCCCCGGCGCCCGGAGCCGCCCTGACTT
TCCGGGCGGGGGGGCGAGGCGGAGGGGGAGGGGAAGGCGGCGGGGAGCGGCTGCTTTTTC
TTCTCTTTCGGGCCCTTTCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAGATTTAAGTACTGTCTGCTTGCTGAAGACACCTTGCAATTTCAACGATTCCTTTGA
GGGAACAGATGTTACATCGGAGCAGAGATAAGATGCCACCAATGGTTGCAGCTTTCCCAA
GTCTTCCTTGGTAGGATTATTTCGGAAGTCTAGACTGGGATCCTCTGCAGCAATGGCTTT
TCTTTTGGTTCCGTTGGCAGCAATAAGGATGTTGGCGTTGCCGTTATTTTCGGCACTGCC
AGGGGACAAAGTGGAGGATGGGGGAGCCAGTTTGAACCGGATATGGTGTGCTTCAGCTGC
TGCATCAGTGAGAGCGGGCGCCATCGCAGCCATTCAGCACAGAGAGACAGGAAGTCCAGC
CTCTCCCGCTGCCGAGGCCAGCTCCACAGCCCCTTACTGCCTCCCCAGAGAACAGACACG
TGATGGAAGAGCGTTGCCCGGGCGGATTCAGCCCACAAAATGGGCGCAGTTTGCAAACAG
CCCCCGGCCTGGGCGCCAAGGGCCGGCGGCGGCGGCGGCAGCGGGCGGGGGCGCGCGGCG
GCGGCTCCGGCCCGGGCCCGCCGCTCTCCTCCCCCCCGGCGCCCGGAGCCGCCCTGACTT
TCCGGGCGGGGGGGCGAGGCGGAGGGGGAGGGGAAGGCGGCGGGGAGCGGCTGCTTTTTC
TTCTCTTTCGGGCCCTTTCTCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               160-393, + strand, RNAz p=0.831397

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-393, + strand, RNAz p=0.831397

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               301-408, - strand, RNAmicro p=0.998645

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               301-408, - strand, RNAmicro p=0.998645

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-417, gnl|bosTau2|chr19 (41813644-41813228)
               

               
               1-417, gnl|Hg17|chr17 (41604954-41605376)
               

               
               1-417, gnl|Mm7|chr11 (104533919-104534335)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-417, gnl|bosTau2|chr19 (41813644-41813228)
               

               
               1-417, gnl|Hg17|chr17 (41604954-41605376)
               

               
               1-417, gnl|Mm7|chr11 (104533919-104534335)

	1-417, gnl\|bosTau2\|chr19 (41813644-41813228)
	1-417, gnl\|Hg17\|chr17 (41604954-41605376)
	1-417, gnl\|Mm7\|chr11 (104533919-104534335)