Mixc-0039,i20
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCAGTTTGATGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCAG GAATGGACAGATCCTCTCCAGATAACAGCCCGGTGCACGGGATGTTACGCCAGCCATCCA TCACGACTGGAGTCAACATCCCCATCATTACTGAACTAGTGAATGATACTAATGTCCAGT TTTTGGACCAAGATGATGACGATGACCCGGACACAGAACTGTACCTCACGCAGCCCTTTG CATGTGGGACAGCGTTTGCCGTCAGCGTCCTGGATTCACTCATGAGCGCGACATACTTCA ATGACAACATCCTTACCCTGATACGGACCTTGGTGACCGGAGGAGCCACACCGGAGCTGG AGGCTCTGATTGCCGAGGAGAATGCGCTGCGCGGGGGCTACAGCACCCCCCAGACGCTGG CCAATCGGGACCGCTGCCGCGTGGCCCAGTTAGCACTGCTGGATGGGCCCTTTGCGGACC TGGGGGATGGTGGTTGTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACGTATAATATGC TTTGTTTTGGAATTTACCGGCTGAGAGATGCTCACCTCAGCACGCCCCAGCCAGTGCACA AAGAGGTATGTCATCACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCAGTTTGATGACAGCATCGGGGTCTTGCAGGCTAATTCCCAAGGATTCACACCTCCAG GAATGGACAGATCCTCTCCAGATAACAGCCCGGTGCACGGGATGTTACGCCAGCCATCCA TCACGACTGGAGTCAACATCCCCATCATTACTGAACTAGTGAATGATACTAATGTCCAGT TTTTGGACCAAGATGATGACGATGACCCGGACACAGAACTGTACCTCACGCAGCCCTTTG CATGTGGGACAGCGTTTGCCGTCAGCGTCCTGGATTCACTCATGAGCGCGACATACTTCA ATGACAACATCCTTACCCTGATACGGACCTTGGTGACCGGAGGAGCCACACCGGAGCTGG AGGCTCTGATTGCCGAGGAGAATGCGCTGCGCGGGGGCTACAGCACCCCCCAGACGCTGG CCAATCGGGACCGCTGCCGCGTGGCCCAGTTAGCACTGCTGGATGGGCCCTTTGCGGACC TGGGGGATGGTGGTTGTTATGGTGATCTGTTCTGCAAAGCTCTGAAAACGTATAATATGC TTTGTTTTGGAATTTACCGGCTGAGAGATGCTCACCTCAGCACGCCCCAGCCAGTGCACA AAGAGGTATGTCATCACC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 156-289, + strand, RNAz p=0.802487 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 156-289, + strand, RNAz p=0.802487 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 156-289, gnl|bosTau2|chr28 (24747991-24747858) | |
| 156-289, gnl|canFam2|chr4 (30087736-30087873) | |
| 156-289, gnl|danRer3|chr13 (14048465-14048607) | |
| 156-289, gnl|dasNov1|scaffold_10347 (43166-43309) | |
| 156-289, gnl|echTel1|scaffold_262340 (9964-9821) | |
| 156-289, gnl|fr1|chrUn (59511260-59511118) | |
| 156-289, gnl|galGal2|chr6 (13034513-13034364) | |
| 156-289, gnl|hg17|chr10 (78339720-78339863) | |
| 156-289, gnl|Hg17|chr10 (78339864-78339731) | |
| 156-289, gnl|loxAfr1|scaffold_32756 (5336-5193) | |
| 156-289, gnl|mm7|chr14 (20988569-20988712) | |
| 156-289, gnl|Mm7|chr14 (20988713-20988580) | |
| 156-289, gnl|monDom2|scaffold_14 (5364259-5364407) | |
| 156-289, gnl|oryCun1|scaffold_202463 (223090-222947) | |
| 156-289, gnl|panTro1|chr8 (79614714-79614857) | |
| 156-289, gnl|rheMac2|chr9 (60139041-60138898) | |
| 156-289, gnl|rn3|chr15 (904945-904802) | |
| 156-289, gnl|tetNig1|chr17 (6250536-6250393) | |
| 156-289, gnl|xenTro1|scaffold_249 (819430-819568) | |
| 290-486, gnl|bosTau2|chr28 (24730705-24730509) | |
| 290-486, gnl|Hg17|chr10 (78321484-78321288) | |
| 290-486, gnl|Mm7|chr14 (20972057-20971861) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 156-289, gnl|bosTau2|chr28 (24747991-24747858) | |
| 156-289, gnl|canFam2|chr4 (30087736-30087873) | |
| 156-289, gnl|danRer3|chr13 (14048465-14048607) | |
| 156-289, gnl|dasNov1|scaffold_10347 (43166-43309) | |
| 156-289, gnl|echTel1|scaffold_262340 (9964-9821) | |
| 156-289, gnl|fr1|chrUn (59511260-59511118) | |
| 156-289, gnl|galGal2|chr6 (13034513-13034364) | |
| 156-289, gnl|hg17|chr10 (78339720-78339863) | |
| 156-289, gnl|Hg17|chr10 (78339864-78339731) | |
| 156-289, gnl|loxAfr1|scaffold_32756 (5336-5193) | |
| 156-289, gnl|mm7|chr14 (20988569-20988712) | |
| 156-289, gnl|Mm7|chr14 (20988713-20988580) | |
| 156-289, gnl|monDom2|scaffold_14 (5364259-5364407) | |
| 156-289, gnl|oryCun1|scaffold_202463 (223090-222947) | |
| 156-289, gnl|panTro1|chr8 (79614714-79614857) | |
| 156-289, gnl|rheMac2|chr9 (60139041-60138898) | |
| 156-289, gnl|rn3|chr15 (904945-904802) | |
| 156-289, gnl|tetNig1|chr17 (6250536-6250393) | |
| 156-289, gnl|xenTro1|scaffold_249 (819430-819568) | |
| 290-486, gnl|bosTau2|chr28 (24730705-24730509) | |
| 290-486, gnl|Hg17|chr10 (78321484-78321288) | |
| 290-486, gnl|Mm7|chr14 (20972057-20971861) |