Non-Coding RNA Search

Mixc-0039,k23

Sequence:


               
               GCACCCAGGACTCCAGTCTCCCTGGAGTTTGTGTACACAGCGTGGACACCGAGCATCCGT
CAGGTAAACCGGAGGTTCTTGTCCCGGCAGAAATCTAAATCGAGTGCAGGTGAGGTCCCC
GCAGTCGCGTCAACTGGACCGGCTCGTGACACGCACAGGCCTCGACCCGCACGCGGCTCC
GGACCGACAGACGCACACGCCGAGAACGCCGCGCGAGTTCACAAAGCTGCCAGCTGAAAA
AGACTCTGGAGGCGGCCGGAGACTGTAAGGCGGCGGAGGAGAGCGAGAGGCCGAAGCCAC
GCAGCCGCCGGAAGCCTAGGGTCCTCTTCTCGCAAGCCCAGGTCTTCGAGCTGGAACGCA
GGTTCAAGCAGCAGCGGTACCTGTCTGCGCCGGAGCGCGAGCACCTCGCCAGCAGCCTGA
AACTCACGTCCACTCAGGTGAAGATCTGGTTCCAGAATCGCAGGTACAAGTGCAAGAGAC
AGCGGCAGGACAAGTCTCTGGAGCTGGGTGGGCACGCGCCCCCTCCGCCCCCGCGCCGCG
TGGCGGTGCCGGTGCTGGTGCGGGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACCCAGGACTCCAGTCTCCCTGGAGTTTGTGTACACAGCGTGGACACCGAGCATCCGT
CAGGTAAACCGGAGGTTCTTGTCCCGGCAGAAATCTAAATCGAGTGCAGGTGAGGTCCCC
GCAGTCGCGTCAACTGGACCGGCTCGTGACACGCACAGGCCTCGACCCGCACGCGGCTCC
GGACCGACAGACGCACACGCCGAGAACGCCGCGCGAGTTCACAAAGCTGCCAGCTGAAAA
AGACTCTGGAGGCGGCCGGAGACTGTAAGGCGGCGGAGGAGAGCGAGAGGCCGAAGCCAC
GCAGCCGCCGGAAGCCTAGGGTCCTCTTCTCGCAAGCCCAGGTCTTCGAGCTGGAACGCA
GGTTCAAGCAGCAGCGGTACCTGTCTGCGCCGGAGCGCGAGCACCTCGCCAGCAGCCTGA
AACTCACGTCCACTCAGGTGAAGATCTGGTTCCAGAATCGCAGGTACAAGTGCAAGAGAC
AGCGGCAGGACAAGTCTCTGGAGCTGGGTGGGCACGCGCCCCCTCCGCCCCCGCGCCGCG
TGGCGGTGCCGGTGCTGGTGCGGGAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47207662|emb|CAF94550.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47207662|emb|CAF94550.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               220-565, gnl|bosTau2|chr26 (11932595-11932940)
               

               
               220-565, gnl|Hg17|chr10 (101284729-101285074)
               

               
               220-565, gnl|Mm7|chr19 (43508176-43508521)
               


               
               290-559, gnl|bosTau2|chr13 (25709743-25710029)
               

               
               290-559, gnl|Hg17|chr20 (21325073-21324772)
               

               
               290-559, gnl|Mm7|chr2 (146825248-146824956)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               220-565, gnl|bosTau2|chr26 (11932595-11932940)
               

               
               220-565, gnl|Hg17|chr10 (101284729-101285074)
               

               
               220-565, gnl|Mm7|chr19 (43508176-43508521)
               


               
               290-559, gnl|bosTau2|chr13 (25709743-25710029)
               

               
               290-559, gnl|Hg17|chr20 (21325073-21324772)
               

               
               290-559, gnl|Mm7|chr2 (146825248-146824956)

	220-565, gnl\|bosTau2\|chr26 (11932595-11932940)
	220-565, gnl\|Hg17\|chr10 (101284729-101285074)
	220-565, gnl\|Mm7\|chr19 (43508176-43508521)

	290-559, gnl\|bosTau2\|chr13 (25709743-25710029)
	290-559, gnl\|Hg17\|chr20 (21325073-21324772)
	290-559, gnl\|Mm7\|chr2 (146825248-146824956)