Non-Coding RNA Search

Mixc-0040,g04

Sequence:


               
               GCTACCCAGACAGAAATGCATTAGAACAATATACCTGAGTAGAGAATTAGTCCATGGCAT
CCTCACAGTGGTAGAACCCTCTGCCTTTCCATAGGCAGTTGTAACTGGGACCACGGACCT
CAGAGGTTTAGGCTGCCATGCACTCCCTTACTTAAGATAAATTAAGAAACTACCAAGAGT
TCCCTGCCAGTCTAGTGGTTAGGACTTGGCACTTTCACTGATGTGGCCCAGGTTCAGCCC
CTGGTCTGGGAACTGAGATCCCATATCAAGCTGCTGCACGCTGTTGTGGCAAAAAGTAAA
TAAATAAATAAAAATAAACTATGAGTTCTGACTCCCTCAGAAAACAGAGTATGGGTGACT
TGGGCGTAACCTGGCTGTCTATTCACCTAGAAGCTTTCCCTCATGTTTCTCGGAAGCTCG
GTTCTACCAAAAAGAATCCTCAACTTCTCTTCTTTATAAACTGTCACTTCCTTATTTCGT
TGGGGGTATTCGTTGAGGGGAAGGAAAAAAGTCTTTAGAAAAGTGACACTGTTGAAAAGT
GCTAGTTGTAGTTCGGCCATTTTAGTGGCAAGCTCATTAATAACAGATTGCATTGTATTT
TATGACTATGTTTTGTAGAATTTTTACAAAGAAAAGAAGAGAGAAGACATCTACATAAGG
TAAGAAGGAAATTTCTACTTTTTCTATTTATGGCATGGCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTACCCAGACAGAAATGCATTAGAACAATATACCTGAGTAGAGAATTAGTCCATGGCAT
CCTCACAGTGGTAGAACCCTCTGCCTTTCCATAGGCAGTTGTAACTGGGACCACGGACCT
CAGAGGTTTAGGCTGCCATGCACTCCCTTACTTAAGATAAATTAAGAAACTACCAAGAGT
TCCCTGCCAGTCTAGTGGTTAGGACTTGGCACTTTCACTGATGTGGCCCAGGTTCAGCCC
CTGGTCTGGGAACTGAGATCCCATATCAAGCTGCTGCACGCTGTTGTGGCAAAAAGTAAA
TAAATAAATAAAAATAAACTATGAGTTCTGACTCCCTCAGAAAACAGAGTATGGGTGACT
TGGGCGTAACCTGGCTGTCTATTCACCTAGAAGCTTTCCCTCATGTTTCTCGGAAGCTCG
GTTCTACCAAAAAGAATCCTCAACTTCTCTTCTTTATAAACTGTCACTTCCTTATTTCGT
TGGGGGTATTCGTTGAGGGGAAGGAAAAAAGTCTTTAGAAAAGTGACACTGTTGAAAAGT
GCTAGTTGTAGTTCGGCCATTTTAGTGGCAAGCTCATTAATAACAGATTGCATTGTATTT
TATGACTATGTTTTGTAGAATTTTTACAAAGAAAAGAAGAGAGAAGACATCTACATAAGG
TAAGAAGGAAATTTCTACTTTTTCTATTTATGGCATGGCTTT

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               181-252, tRNA Glu : RF00005;tRNA; (AJ410870.2/120022-120093), RaveNnA 
Score=25.57

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               181-252, tRNA Glu : RF00005;tRNA; (AJ410870.2/120022-120093), RaveNnA 
Score=25.57