Mixc-0040,i02
|
TGGTTCTTGCTCTTCAACACTTGGCTAAANCTTGGATTTCTCCTCATCGTCAAAAACCGG
GTTTTTAGGACGAGGCGGGGGAGAGGGGATCAGCGTCCTGTCCACAGGGAGCAGCGGGTC
AGACTGCACGATGCCCTGTCTCTTCAGCATGTGGTAGGCATCCTTGATCTTTGATTCCTC
TGCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGGTTCTTGCTCTTCAACACTTGGCTAAANCTTGGATTTCTCCTCATCGTCAAAAACCGG
GTTTTTAGGACGAGGCGGGGGAGAGGGGATCAGCGTCCTGTCCACAGGGAGCAGCGGGTC
AGACTGCACGATGCCCTGTCTCTTCAGCATGTGGTAGGCATCCTTGATCTTTGATTCCTC
TGCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
29-135, gnl|bosTau2|chr19 (50806166-50806060) |
|
29-135, gnl|canFam2|chr9 (8242192-8242119) |
|
29-135, gnl|danRer3|chrNA (3226000-3226066) |
|
29-135, gnl|dasNov1|scaffold_3648 (38427-38351) |
|
29-135, gnl|echTel1|scaffold_301566 (382-454) |
|
29-135, gnl|fr1|chrUn (236115338-236115407) |
|
29-135, gnl|galGal2|chr3_random (1400527-1400600) |
|
29-135, gnl|hg17|chr17 (70750732-70750805) |
|
29-135, gnl|Hg17|chr17 (70750737-70750843) |
|
29-135, gnl|loxAfr1|scaffold_23968 (16462-16396) |
|
29-135, gnl|mm7|chr11 (115700301-115700374) |
|
29-135, gnl|Mm7|chr11 (115700306-115700412) |
|
29-135, gnl|monDom2|scaffold_18 (32754447-32754520) |
|
29-135, gnl|oryCun1|scaffold_183169 (15810-15737) |
|
29-135, gnl|panTro1|chr19 (74100653-74100726) |
|
29-135, gnl|rheMac2|chr16 (70538407-70538480) |
|
29-135, gnl|rn3|chr10 (105686690-105686763) |
|
29-135, gnl|tetNig1|chr3 (8721436-8721510) |
|
29-135, gnl|xenTro1|scaffold_632 (132323-132249) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
29-135, gnl|bosTau2|chr19 (50806166-50806060) |
|
29-135, gnl|canFam2|chr9 (8242192-8242119) |
|
29-135, gnl|danRer3|chrNA (3226000-3226066) |
|
29-135, gnl|dasNov1|scaffold_3648 (38427-38351) |
|
29-135, gnl|echTel1|scaffold_301566 (382-454) |
|
29-135, gnl|fr1|chrUn (236115338-236115407) |
|
29-135, gnl|galGal2|chr3_random (1400527-1400600) |
|
29-135, gnl|hg17|chr17 (70750732-70750805) |
|
29-135, gnl|Hg17|chr17 (70750737-70750843) |
|
29-135, gnl|loxAfr1|scaffold_23968 (16462-16396) |
|
29-135, gnl|mm7|chr11 (115700301-115700374) |
|
29-135, gnl|Mm7|chr11 (115700306-115700412) |
|
29-135, gnl|monDom2|scaffold_18 (32754447-32754520) |
|
29-135, gnl|oryCun1|scaffold_183169 (15810-15737) |
|
29-135, gnl|panTro1|chr19 (74100653-74100726) |
|
29-135, gnl|rheMac2|chr16 (70538407-70538480) |
|
29-135, gnl|rn3|chr10 (105686690-105686763) |
|
29-135, gnl|tetNig1|chr3 (8721436-8721510) |
|
29-135, gnl|xenTro1|scaffold_632 (132323-132249) |
