Non-Coding RNA Search

Mixc-0041,g20

Sequence:


               
               GGGAAGGGAGGGGGGAAGAGAGGGAGGAAGGGGGGGCAGGCTGTANGAGCCGGAGAGGGG
TTCAAGAGAAGAATTAGGGAATATGGAGGCTATGAGGAATCAAGATCATTAGTGTTCAGT
GAATTAGAAAAAATAAAACAAACTGTGTTCTTTGCCTGCGCTCCCCCCTCTGCGTGCGGG
TTTTGTGAGAGCCTCGCTCTCCGCAGGTCCTTTTTCCCCCGGCCTGGACACCCCCACCTC
CGCCTTAATGCTGTTTTAGCTTTTCCTCTTGTAAATTTCAGAGCCAGCTCGGAGGTTATT
GAGGACACTTAACCAAAAGAGGGAAATAATAGAGGTGCTGAGAGTGTTTTTGATGTTTCT
TAAAAGGCAAAAACAAAACGCCCTCTTCTAAACAAGGCGGACAATTGTACCTGATTTTTA
TTTTTTTTGGGGGGGGGCGCTGGTTGAATGAGGCTATTTTTTAGTATGATTTACATATTT
TTCCCGAAAAATTAAAAAACTTTCCTCTCTCATATTTAATCAGCTGTAATTATAACACAT
TCTAAATGAATAATATGCCTTGACAGTATTTTTATTGATATTGCTCATTGCATGATGTTC
GACTGCTTTAGAAGCACAGGAAAGAGAAGTAAACGCGCTACAAATGGGGAATTACCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAAGGGAGGGGGGAAGAGAGGGAGGAAGGGGGGGCAGGCTGTANGAGCCGGAGAGGGG
TTCAAGAGAAGAATTAGGGAATATGGAGGCTATGAGGAATCAAGATCATTAGTGTTCAGT
GAATTAGAAAAAATAAAACAAACTGTGTTCTTTGCCTGCGCTCCCCCCTCTGCGTGCGGG
TTTTGTGAGAGCCTCGCTCTCCGCAGGTCCTTTTTCCCCCGGCCTGGACACCCCCACCTC
CGCCTTAATGCTGTTTTAGCTTTTCCTCTTGTAAATTTCAGAGCCAGCTCGGAGGTTATT
GAGGACACTTAACCAAAAGAGGGAAATAATAGAGGTGCTGAGAGTGTTTTTGATGTTTCT
TAAAAGGCAAAAACAAAACGCCCTCTTCTAAACAAGGCGGACAATTGTACCTGATTTTTA
TTTTTTTTGGGGGGGGGCGCTGGTTGAATGAGGCTATTTTTTAGTATGATTTACATATTT
TTCCCGAAAAATTAAAAAACTTTCCTCTCTCATATTTAATCAGCTGTAATTATAACACAT
TCTAAATGAATAATATGCCTTGACAGTATTTTTATTGATATTGCTCATTGCATGATGTTC
GACTGCTTTAGAAGCACAGGAAAGAGAAGTAAACGCGCTACAAATGGGGAATTACCCTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               251-430, - strand, RNAz p=0.825312

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               251-430, - strand, RNAz p=0.825312

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               8-659, gnl|bosTau2|chr11 (46913257-46912598)
               

               
               8-659, gnl|Hg17|chr2 (66712754-66713460)
               

               
               8-659, gnl|Mm7|chr11 (18831044-18830380)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-659, gnl|bosTau2|chr11 (46913257-46912598)
               

               
               8-659, gnl|Hg17|chr2 (66712754-66713460)
               

               
               8-659, gnl|Mm7|chr11 (18831044-18830380)

	8-659, gnl\|bosTau2\|chr11 (46913257-46912598)
	8-659, gnl\|Hg17\|chr2 (66712754-66713460)
	8-659, gnl\|Mm7\|chr11 (18831044-18830380)